CK939424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_CITSI (Photosystem II reaction center protein H OS=Citrus sinensis GN=psbH PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.144e-33 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGV MALFAVFLSIILEIYNSSVLLDGISLN Sbjct: 1 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISLN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_DRIGR (Photosystem II reaction center protein H OS=Drimys granadensis GN=psbH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.897e-30 Identity = 64/73 (87.67%), Postives = 70/73 (95.89%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVEGSSR+RP+RT+ G LLKPLNSEYGKVAPGWGTTPLMGV MALFA+FLSIILEIYNSSVLLDGIS++ Sbjct: 1 MATQTVEGSSRSRPRRTTTGNLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGISMS 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_VITVI (Photosystem II reaction center protein H OS=Vitis vinifera GN=psbH PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MAT+TVEGSSR+RPK T+ G LLKPLNSEYGKVAPGWGTTPLMGV MALFAVFLSIILEIYNSSVLLDGISLN Sbjct: 1 MATKTVEGSSRSRPKPTTVGELLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISLN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_OENEH (Photosystem II reaction center protein H OS=Oenothera elata subsp. hookeri GN=psbH PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQT E SSRARPK+T GGLLKPLNSEYGKVAPGWGTTPLMG+ MALFAVFLSIILEIYNSSVLLDGIS+N Sbjct: 1 MATQTAEESSRARPKKTGLGGLLKPLNSEYGKVAPGWGTTPLMGLAMALFAVFLSIILEIYNSSVLLDGISMN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_OENAR (Photosystem II reaction center protein H OS=Oenothera argillicola GN=psbH PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQT E SSRARPK+T GGLLKPLNSEYGKVAPGWGTTPLMG+ MALFAVFLSIILEIYNSSVLLDGIS+N Sbjct: 1 MATQTAEESSRARPKKTGLGGLLKPLNSEYGKVAPGWGTTPLMGLAMALFAVFLSIILEIYNSSVLLDGISMN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_LOTJA (Photosystem II reaction center protein H OS=Lotus japonicus GN=psbH PE=3 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 4.942e-30 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVE SSRARP++TS G LLKPLNSEYGKVAPGWGTTPLMG+ MALFA+FLSIILEIYNSS+LLDGIS+N Sbjct: 1 MATQTVEDSSRARPRQTSVGSLLKPLNSEYGKVAPGWGTTPLMGIAMALFAIFLSIILEIYNSSILLDGISMN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_SPIOL (Photosystem II reaction center protein H OS=Spinacia oleracea GN=psbH PE=1 SV=4) HSP 1 Score: 130.954 bits (328), Expect = 8.430e-30 Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVE SSR+RPK T+ G LLKPLNSEYGKVAPGWGTTPLMGV MALFAVFLSIILEIYNSSVLLDGIS+N Sbjct: 1 MATQTVESSSRSRPKPTTVGALLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_EUCGG (Photosystem II reaction center protein H OS=Eucalyptus globulus subsp. globulus GN=psbH PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.101e-29 Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVEGSSR+ P+RT G LLKPLNSEYGKVAPGWGTTPLMGV MALFAVFLSIILEIYNSSVLLDGIS+N Sbjct: 1 MATQTVEGSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_TOBAC (Photosystem II reaction center protein H OS=Nicotiana tabacum GN=psbH PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29 Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVE SSR+ P+RT+ G LLKPLNSEYGKVAPGWGTTPLMGV MALFAVFLSIILEIYNSSVLLDGIS+N Sbjct: 1 MATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
BLAST of CK939424 vs. ExPASy Swiss-Prot
Match: PSBH_SOLTU (Photosystem II reaction center protein H OS=Solanum tuberosum GN=psbH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29 Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 3 Query: 12 MATQTVEGSSRARPKRTSAGGLLKPLNSEYGKVAPGWGTTPLMGVVMALFAVFLSIILEIYNSSVLLDGISLN 230 MATQTVE SSR+ P+RT+ G LLKPLNSEYGKVAPGWGTTPLMGV MALFAVFLSIILEIYNSSVLLDGIS+N Sbjct: 1 MATQTVENSSRSGPRRTAVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73 The following BLAST results are available for this feature:
BLAST of CK939424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939424 ID=CK939424; Name=CK939424; organism=Citrus sinensis; type=EST; length=839bpback to top |