CN188187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 310.842 bits (795), Expect = 5.654e-84 Identity = 152/168 (90.48%), Postives = 160/168 (95.24%), Query Frame = -3 Query: 310 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCST 813 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVGNK DLT N+ + YETAKAFADEIGIPFMETSAK ATNVEQAFMAM+ASIK RMASQPA NNARPPTVQIRGQPV QK+GCCST Sbjct: 36 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVAQKNGCCST 203
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.645e-83 Identity = 153/168 (91.07%), Postives = 163/168 (97.02%), Query Frame = -3 Query: 310 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCST 813 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVGNK DLTANKVV+ ETAKAFADE+GIPFMETSAK+ATNV+QAFMAMAASIK+RMASQPA+ NARP TVQIRGQPVNQK+ CCS+ Sbjct: 36 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQIRGQPVNQKTSCCSS 203
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 4.953e-80 Identity = 146/167 (87.43%), Postives = 154/167 (92.22%), Query Frame = -3 Query: 313 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 813 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL N+VVSYE KA ADEIGIPF+ETSAK ATNVE+AFM MA IKNRMASQPA+N ++P TVQ+RGQPV Q+S CCS Sbjct: 36 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPVAQQSSCCS 202
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 7.660e-73 Identity = 139/167 (83.23%), Postives = 146/167 (87.43%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR-GQPVNQKSGCC 813 SYISTIGVDFKIRTVE DGK IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK DLT+ KVV Y AKAFADEIGIPF+ETSAK+ATNVEQAFM MAA IKNRMASQP A P V+ + G+P+N KS C Sbjct: 36 SYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQEGKPINSKSSSC 202
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.887e-71 Identity = 137/167 (82.04%), Postives = 143/167 (85.63%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ-IRGQPVNQKSGCC 813 SYISTIGVDFKIRTVE DGK IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DLT KVV Y+ AKAFADEIGIPF+ETSAK+ATNVEQAFM MAA IKNRMASQP P V+ G+P+N KS C Sbjct: 36 SYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKPGGPVVRPTEGKPINNKSSSC 202
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 262.307 bits (669), Expect = 2.306e-69 Identity = 130/166 (78.31%), Postives = 138/166 (83.13%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 813 SYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 39 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 262.307 bits (669), Expect = 2.306e-69 Identity = 130/166 (78.31%), Postives = 138/166 (83.13%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 813 SYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 39 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 262.307 bits (669), Expect = 2.306e-69 Identity = 130/166 (78.31%), Postives = 138/166 (83.13%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 813 SYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 39 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 262.307 bits (669), Expect = 2.306e-69 Identity = 130/166 (78.31%), Postives = 138/166 (83.13%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 813 SYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 39 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of CN188187 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 5.138e-69 Identity = 130/166 (78.31%), Postives = 136/166 (81.93%), Query Frame = -3 Query: 316 SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 813 SYISTIGVDFKIRT+E DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK+ATNVEQAFM MAA IK RM S + V I+ PV G C Sbjct: 36 SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKSSGGGC 201 The following BLAST results are available for this feature:
BLAST of CN188187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188187 ID=CN188187; Name=CN188187; organism=Citrus sinensis; type=EST; length=815bpback to top |