CN188107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29 Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 2 Query: 299 PKDLPATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 P ++ NI DV+QLIG TP+V+LN + +GC A IA K E+ +P S+KDR +M+ DAE K LISPGKT ++EPTSGN GI +AF+AA +GYK++LTMP+ SL Sbjct: 59 PTEIEGLNIAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSL 165
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.574e-28 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 2 Query: 239 VSSQPAPVDSSSFAQRLRDLPKDLPATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 VSS P + S + P + NI DVSQLIG+TP+V+LN VS+G A IA K E +P S+KDR +M++DAE K +I+PGKTT++EPTSGN GI +AF+AA +GYK+ LTMP+ S+ Sbjct: 44 VSSSPITCKAVSLSP-----PSTIEGLNIAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSM 165
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.056e-28 Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 2 Query: 305 DLPATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 ++ NI DV+QLIG TP+V+LN +++GC A IA K E+ +P S+KDR +M+ DAE K LISPGKT ++EPTSGN GI +AF+AA +GYK++LTMP+ SL Sbjct: 63 EIEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSL 167
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.981e-28 Identity = 59/100 (59.00%), Postives = 77/100 (77.00%), Query Frame = 2 Query: 320 NIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 +I DV+ LIG TPLV+LNKV +GC A IA K E+ +P +S+KDR +M+ DAE K LI+PGK+ +IEPTSGN GI +AFMAA KGYK++LTMP+ S+ Sbjct: 7 SIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSM 106
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.969e-27 Identity = 55/101 (54.46%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 317 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 + I +DV++LIG TPLV+LN+V +GC A +A K EM +P +S+KDR +M+ DAENK LI+PG++ +IEPTSGN GI +AF+AA KGY++++ MP+ SL Sbjct: 6 STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSL 106
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.969e-27 Identity = 56/99 (56.57%), Postives = 77/99 (77.78%), Query Frame = 2 Query: 323 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 I +DV++LIG TPLV+LN+V++GC +A K E +P +S+KDR +M+ DAE K LI+PGK+ +IEPTSGN GI +AFMAA KGY++VLTMP+ S+ Sbjct: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSM 103
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.969e-27 Identity = 55/102 (53.92%), Postives = 77/102 (75.49%), Query Frame = 2 Query: 314 ATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 A+ I +DV++LIG TPLV+LN V+EGC +A K EM +P +S+KDR +M+ DAE K LI PG++ +IEPTSGN G+ +AF AA KGYK+++TMP+ S+ Sbjct: 2 ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSV 103
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 3.877e-27 Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = 2 Query: 314 ATNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTS 616 A+ I +DV++LIG TPLV+LN V+EGC +A K EM +P +S+KDR +M+ DAE K LI PG++ +IEPTSGN G+ +AF AA KGYK+++TMP+ S Sbjct: 2 ASRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMS 102
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.064e-27 Identity = 56/99 (56.57%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 323 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 I +DV++LIG TPLV+LN V +GC A +A K E +P +S+KDR +M+ DAE K LI PG++ +IEPTSGN G+ +AFMAA KGYK+++TMPS SL Sbjct: 8 IAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSL 106
BLAST of CN188107 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.637e-27 Identity = 56/99 (56.57%), Postives = 75/99 (75.76%), Query Frame = 2 Query: 323 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSL 619 I +DV++LIG TPLV+LNKV++GC +A K E +P +S+KDR +M+ DAE K I PGK+ +IEPTSGN GI +AFMAA KGY++VLTMP+ S+ Sbjct: 9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSM 107 The following BLAST results are available for this feature:
BLAST of CN188107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188107 ID=CN188107; Name=CN188107; organism=Citrus sinensis; type=EST; length=620bpback to top |