CN188064

Overview
NameCN188064
Unique NameCN188064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9923 contig Csv1_Contig9923:80..799. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.715e-35
Identity = 88/226 (38.94%), Postives = 127/226 (56.19%), Query Frame = 1
Query:   55 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHREF----GGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            L  M+LA+   +PM L +AI L + + I + GA   +S +++  ++L +       L RILRLLTSY +     +     G +R Y L  + K L  + +G+S AP  L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +G+NFDLP VV +APS PG
Sbjct:   19 LFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSI-KGINFDLPHVVEDAPSYPG 242          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.496e-34
Identity = 91/227 (40.09%), Postives = 132/227 (58.15%), Query Frame = 1
Query:   55 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            L+ M LA+   +PM L +AI L + + I + G    +S S++  + LP+   DA   L RILRLL SY V +    +  + G ER YSL  + K L  + +G+S A  +L +    LM +W  + +AVL+  I PF K +G  A+ Y+GK P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +G+NFDLP V+ +APS PG
Sbjct:   21 LSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQ-LPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGI-PFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPG 244          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33
Identity = 90/227 (39.65%), Postives = 127/227 (55.95%), Query Frame = 1
Query:   55 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFSEHREF----GGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            L  M+LA+   +PM L +AI L + + I + GA   +S   +  + LP+   DA   L RILRLLTSY +     +     G ER Y L  + K L  + +G+S AP  L +    LM +W  + +AV+D  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +G+NFDLP V+ +APS PG
Sbjct:   19 LFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQ-LPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPG 242          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 85/226 (37.61%), Postives = 130/226 (57.52%), Query Frame = 1
Query:   55 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS-EHREFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            L  M+LA+   +PM+L +A+ L + + + + G+  P+S ++I +++          L RILRLLTSY V +  +R+  G   ER Y L  + K L  + +G+S A   L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +    MS  S   M  +L+ Y GF+G+  LVDVGG  G  L+MI+ K+P + +G+NFDLP V+ +APS PG
Sbjct:   21 LFAMQLASASVLPMALKSALELDLLEIMAKNGS--PMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGI-PFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNL-KGINFDLPHVIEDAPSHPG 242          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 87/231 (37.66%), Postives = 128/231 (55.41%), Query Frame = 1
Query:   43 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            ++  L  M+LA+   +PM L  AI L + + + + G    LS S+I +  LP+   DA   L RILRLL SY + +    +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+LD  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +G+NFDLP V+ +APS PG
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASH-LPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPG 244          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 89/227 (39.21%), Postives = 129/227 (56.83%), Query Frame = 1
Query:   55 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            L  M LA+   +PM L +AI L + + I + G    +S S++  + LP+   +A   L RILRLL +Y V     +   + G ER Y L  + K L  +A+G+S AP +L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + MS  S   M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +G+NF+LP VV +APS  G
Sbjct:    8 LFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQ-LPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSG 231          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32
Identity = 88/227 (38.77%), Postives = 127/227 (55.95%), Query Frame = 1
Query:   55 LAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            L  M+LA    +P  LTAAI L + + + + G    L+  ++ ++ LP+   DA   L RI RLL SY V +    +  E   ER Y L  + K LV + +G+S AP  L       + +W  + +A+L+  I PF K HG  A+ Y G  P  N +  +AMS  S   M  +L+ Y+GF+G+K +VDVGG  G  L MI+ K+P I +G+NFDLP V+ +APS PG
Sbjct:    3 LFAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQ-LPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGI-PFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSI-KGINFDLPHVIEDAPSYPG 226          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 86/243 (35.39%), Postives = 129/243 (53.09%), Query Frame = 1
Query:   10 IMDDNECKYGWKKVRLAIMELANMISVPMSLTAAIRLHVPDAIW-QGGANTPLSASQILTR--ILPSGGGDAENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            + D+  C Y         M+LA+   +PM+L  A+ L + + +  +  A   L+  +++ R  + P+    A+ + R+LRLL SY V     E ++   ER+YS   +GK L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  + M   SV     +L+ Y GF+GV  LVDVGG  G  L  I   HP I +G+NFDLP V++EAP  PG
Sbjct:   11 VADEEACMYA--------MQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDLPHVISEAPPFPG 243          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 90/246 (36.59%), Postives = 129/246 (52.44%), Query Frame = 1
Query:   10 IMDDNECKYGWKKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQ--GGANTPLSASQILTRILPSGGGD----AENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            ++D+  C Y         M+LA+   +PM+L  AI L + + + +  GG    L+  +++ R +P+   D    A  + R+LRLL SY V     E R+   ER+YS   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF+GV  LVDVGG  G  L  I  +HP I  GVNFDLP V++EAP  PG
Sbjct:   11 VVDEEACMYA--------MQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVAR-MPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPG 245          
BLAST of CN188064 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32
Identity = 86/231 (37.23%), Postives = 128/231 (55.41%), Query Frame = 1
Query:   43 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGVNFDLPEVVAEAPSIPG 720
            ++  L  M+LA+   +PM L  AI L + + + + G    LS S+I +  LP+   DA   L RILRLL SY + +    +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVDVGG  G  +  I+ K+P I +G+NFDLP V+ +APS PG
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASH-LPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSI-KGINFDLPHVIEDAPSYPG 244          
The following BLAST results are available for this feature:
BLAST of CN188064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT2_OCIBA6.715e-3538.94Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CATRO1.496e-3440.09Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_OCIBA1.266e-3339.65Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT1_ARATH1.829e-3237.61Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_POPTM1.829e-3237.66Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_COFCA1.829e-3239.21Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_EUCGL2.388e-3238.77Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_SACOF4.074e-3235.39Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE4.074e-3236.59Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_POPKI5.321e-3237.23Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005H03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188064 ID=CN188064; Name=CN188064; organism=Citrus sinensis; type=EST; length=720bp
CAATAATTAATTATGGATGATAACGAGTGCAAATATGGCTGGAAGAAGGT
AAGACTGGCCATAATGGAGCTGGCCAATATGATAAGTGTTCCCATGTCTC
TAACCGCTGCCATCCGTCTCCACGTACCGGATGCCATCTGGCAAGGTGGG
GCCAACACCCCTCTCTCCGCCTCCCAGATCTTGACACGTATCCTCCCATC
CGGCGGTGGGGACGCCGAGAACTTGCAACGTATCCTCCGCTTGCTCACCA
GCTACGGCGTGTTCTCGGAGCATCGCGAGTTTGGAGGCGAAAGGAAGTAC
AGCCTCACCGAGATTGGGAAATCCCTCGTTACTGATGCCGAGGGTCTATC
GTACGCGCCCTACGTGCTCCAGCATCACCAGGACGCGCTTATGAGCGCGT
GGCCTTTGGTGCACGAGGCCGTTCTGGACCCAACTATTGAGCCATTTGTG
AAAGTCCATGGCGAGCCGGCATATAGTTATTATGGGAAGAAGCCTGAAAT
GAACGGCTTGATGCGAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCATGA
CGTCCGTTTTGGACGGTTACGATGGGTTCAAAGGTGTGAAGCGATTGGTT
GATGTGGGTGGGAGTGCAGGCGATTGCCTGAGGATGATATTACAGAAACA
TCCTTTTATATGTGAAGGGGTCAATTTTGATTTGCCTGAAGTTGTTGCCG
AAGCTCCCAGTATCCCTGGA
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