CK939126

Overview
NameCK939126
Unique NameCK939126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 132.88 bits (333), Expect = 1.807e-30
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.807e-30
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 6.866e-30
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.171e-29
Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGLSF KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.812e-29
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGL+ +KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLTISKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 5.812e-29
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGLSFTKL  RLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGF VETVEYKNISFTVWDV
Sbjct:    1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68
[Close]
BLAST of CK939126 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.295e-28
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 2 
Query:  539 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFXVETVEYKNISFTVWDV 742
            MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILY+LKLGEIVTTIPTIGF VETVEY+ ISFTVWDV
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDV 68
The following BLAST results are available for this feature:
BLAST of CK939126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ARF_VIGUN1.807e-3098.53ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF1_DAUCA1.807e-3098.53ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF_MAIZE4.025e-3097.06ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF2_ORYSJ4.025e-3097.06ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ4.025e-3097.06ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF2_ARATH6.866e-3097.06ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_ARATH1.171e-2997.06ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_SOLTU5.812e-2994.12ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]
ARF1_SALBA5.812e-2994.12ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF1_CATRO1.295e-2894.12ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004433_H10 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650003_IIF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939126 ID=CK939126; Name=CK939126; organism=Citrus sinensis; type=EST; length=743bp
GGGGAAGGCAAAAACCGCTCTCTTCCTCAGGCAAGTCGTTTTACTCTCTA
GTTGGTCTCGCTTAATCGTACGGTCTCTAGATCCTGATCTCTCCATTTTC
TTATTTGATTGATATCTCTAGTCTTTCTTGATCTCTATGTCTGATCTGGC
CTTGTTATTCTTCGATCTGCATGTTAATTGCGAGCCGTTGCTCGAATTGG
AAACATTTTTGTCTGTGATCTCCTCATTTCTCATCTTATACAACTTTGAA
TTATCGAAATTACGTATTGATGATTAAGATTTAGGTGTGTTTTATGTCTT
TATTGTATGATCTAACGTAATTGAGGTTTATTTCGTTCTTAAATTATTTC
TAAATGATATTTGGTTATTTTTTCAATTAGATCTAATAATTGCATTTTTG
TTAACCGAATCTTGTGGTGTTATGTAGATATGGTTGGGGCTTTCTTTTGT
TTGTTAGATTTTAATGCTATTGTAATGTTGGAGATGTGTGAACATGTCAT
CTGATCTCTGCATTGGTTGGTGCTTGCAGTTGTGAAAAATGGGGCTGTCT
TTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAAAGAGATGAGAATTCT
CATGGTAGGTCTCGATGCAGCTGGTAAGACTACTATCCTGTACAAGCTTA
AGCTCGGAGAGATCGTCACCACCATTCCTACCATTGGATTTNNNGTAGAG
ACCGTTGAGTATAAGAACATCAGCTTTACTGTCTGGGATGTCG
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