CK939086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939086 vs. ExPASy Swiss-Prot
Match: NPS13_ARATH (Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 6.541e-87 Identity = 162/192 (84.38%), Postives = 179/192 (93.23%), Query Frame = 2 Query: 203 MATDLQMSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIKEMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSLGNKKVELFDMGAGVS-EPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQMVVEQTIEVGTQTATTLKGQTDQMGRIDNELD 775 MA++L MSPQLEQIHGEIRD+FRAL+NGFQ+LDKIKDS RQ+KQLEELT +MRECKRL+KE DRE+KDEEARN PEVNKQLNDEKQSMIKELNSYVALRKTYM++LGNKKVELFDMGAGVS EPTA+ENVQVASSMSNQEL+DAG K MDETDQAI+RS+ VVEQT+EVGTQTA LKGQTDQMGR+ N LD Sbjct: 1 MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVKEFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGRVVNHLD 192
BLAST of CK939086 vs. ExPASy Swiss-Prot
Match: NPS12_ARATH (Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 5.731e-83 Identity = 153/192 (79.69%), Postives = 177/192 (92.19%), Query Frame = 2 Query: 203 MATDLQMSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIKEMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSLGNKKVELFDMGAGVS-EPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQMVVEQTIEVGTQTATTLKGQTDQMGRIDNELD 775 MA++L MSP LEQIHGEIRD+FRAL+NGFQ+LDKIKDS+RQ+KQLEEL +MR+CKRL+KE DRE+KD EARN P+VNKQLNDEKQSMIKELNSYVALRKTY+N+LGNKKVELFD GAGVS EPTA+ENVQ+AS+MSNQEL+DAG K MDETDQAI+RS+ VV QT+EVGTQTA+ LKGQTDQMGR+ N+LD Sbjct: 1 MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVKEFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGNKKVELFDTGAGVSGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMGRVVNDLD 192
BLAST of CK939086 vs. ExPASy Swiss-Prot
Match: NPS11_ARATH (Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.964e-55 Identity = 110/187 (58.82%), Postives = 143/187 (76.47%), Query Frame = 2 Query: 221 MSPQLEQIHGEIRDNFRALSNGFQKLDKIKDSNRQTKQLEELTGRMRECKRLIKEMDREIKDEEARNPPEVNKQLNDEKQSMIKELNSYVALRKTYMNSL--GNKKVELFDMGAGVSEPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQMVVEQTIEVGTQTATTLKGQTDQMGRIDNELD 775 +S +L +I G+I D FRALSNGFQKL+KIKD+NRQ++QLEELT +MR+CK LIK+ DREIK E+ N N+ LND +QSM+KELNSYVAL+K Y ++L NK+V+LFD G E +ENV +AS+MSNQEL+D G MD+TDQAI+R + +V++TI VGT T+ LK QT+QM R+ NELD Sbjct: 7 VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREIKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD---GPGEEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKPQTEQMSRVVNELD 190 The following BLAST results are available for this feature:
BLAST of CK939086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939086 ID=CK939086; Name=CK939086; organism=Citrus sinensis; type=EST; length=777bpback to top |