CN187989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.857e-49 Identity = 99/137 (72.26%), Postives = 113/137 (82.48%), Query Frame = -3 Query: 221 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 628 FLWSNA+ FI+K PP+IPEV+IPEEP+LQLA LR EINR LREIASGRD+KKFLS IAGLWV+SI+G +FLTL YI VLL TVP+ Y+KYED+VDS+ EKA AE+KKQYAV DAKV SKIPR LKDKKK Sbjct: 134 FLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKK 270
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.562e-47 Identity = 98/137 (71.53%), Postives = 109/137 (79.56%), Query Frame = -3 Query: 221 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 628 FLWSNA+ FINK PP+IPEV+IPEEP+LQLA LR EINR F LREIASGRDLKKFL IAGLWV+SI+G NFLTL YI VLL TVP+ Y+KYED+VD EKA E+KKQYAV D KVLSKIP LK+KKK Sbjct: 138 FLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKK 274
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.026e-46 Identity = 94/140 (67.14%), Postives = 109/140 (77.86%), Query Frame = -3 Query: 221 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVL----SKIPRSLKDKKK 628 FLWSNA TFI+K P IPEV+IPE+P+LQL LR EINR LLR IASG+D+KKF+ VIAGLWV+SI+GS NFLTLFY VLL T+PV+YEKYED+VD++ EKA EIKKQYAV D KVL SKIPR +KKK Sbjct: 117 FLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.573e-46 Identity = 93/127 (73.23%), Postives = 104/127 (81.89%), Query Frame = -3 Query: 248 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKI 628 FLWS+ASTFI+K P IPEV+IPE+ VLQLA LR EINR F +LR+IASGRDLKKFL VIAGLWV+S VGS CNFLTL YI VLL T+PV+YEKYED+VD F EKA EIKKQY FD KVLSK+ Sbjct: 113 FLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45 Identity = 88/137 (64.23%), Postives = 109/137 (79.56%), Query Frame = -3 Query: 221 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIP-RSLKDKKK 628 FLWSNA T INK P+IPE+++PEE L +A +LR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD EKA E++KQY VFD KVLSKIP SLK K K Sbjct: 117 FLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKAK 253
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.809e-42 Identity = 84/135 (62.22%), Postives = 104/135 (77.04%), Query Frame = -3 Query: 227 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIP-RSLKDK 628 FL SNA F+NK PP+IPE++I EE L + ALR E+N+AF +LR IA GRDLKKFL V+ GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD EK E+KK Y VFD KVLSK+P SLK K Sbjct: 117 FLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAK 251
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.265e-37 Identity = 73/128 (57.03%), Postives = 96/128 (75.00%), Query Frame = -3 Query: 245 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIP 628 FLWSNA +NK P + ++YIPE+P+LQ A A+ FE+N AF LR IA RD+K F+ + GLW+VS++G+W +FL+L YI FVL+HTVP++YEKYED +D EKA E+KK Y VF+AK LSKIP Sbjct: 119 FLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKIP 243
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.164e-26 Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = -3 Query: 221 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIPRSLKDKKK 628 F+WSNAS F+N+ R+P + +P++ ++ A+ E+NR L+++A +LK+FL + GLWV ++VGS CNFLT+ YI FV HT+PV+YE+YED VD F + + Y D LS+IP KK Sbjct: 110 FVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSGKFGLKK 245
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.684e-23 Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = -3 Query: 224 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKIPR-SLKDKK 628 F+WS AS F+N P IPEV + E QLA + N+ L ++A GRD F L++VSI+G++ NF+ L +I FV + T+PV+YE YED VD+ K ++KK Y D VLSKIPR ++K+KK Sbjct: 88 FIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223
BLAST of CN187989 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.934e-19 Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = -3 Query: 248 FLWSNASTFINKFPPRIPEVYIPEEPVLQLAFALRFEINRAFPLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFFEKAWAEIKKQYAVFDAKVLSKI 628 FLW+ ++ N+ P++P + I EE V +A A+R IN + REI GR+ K+ V LW VS VG++ NFLT+ Y+ VL +P +YE+Y+D +D I+ QY D ++L KI Sbjct: 63 FLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKI 189 The following BLAST results are available for this feature:
BLAST of CN187989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187989 ID=CN187989; Name=CN187989; organism=Citrus sinensis; type=EST; length=630bpback to top |