CK938965

Overview
NameCK938965
Unique NameCK938965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2144 contig Csv1_Contig2144:1..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.085e-22
Identity = 55/89 (61.80%), Postives = 59/89 (66.29%), Query Frame = 1
Query:   85 NNMAPREKASGPVKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 351
            N ++  +   G VK NG     VKEVH+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                G KAKTNFPLPSEN
Sbjct:    5 NKVSNGDLKGGNVKTNG-----VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPLPSEN 88          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 53/96 (55.21%), Postives = 60/96 (62.50%), Query Frame = 1
Query:   91 MAPREKASGPVKVNGNSNG-------IVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSENVT 357
            MAPR+     + V+    G       + KEVHFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT                G+KAKTNFPLP E+ T
Sbjct:    1 MAPRQANGRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPGESTT 96          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21
Identity = 55/93 (59.14%), Postives = 59/93 (63.44%), Query Frame = 1
Query:   91 MAPREKAS------GPVKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 351
            MA + K S      G VK +G     VKEVH+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT                G KAKTNFP P+EN
Sbjct:    1 MAVKNKVSNGNLKGGNVKTDG-----VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPSPTEN 88          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum GN=ERF3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 45/78 (57.69%), Postives = 50/78 (64.10%), Query Frame = 1
Query:  109 ASGPVKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLP 342
            A  PV    N +G  KE+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+                G KAKTNFPLP
Sbjct:    9 APAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLP 86          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17
Identity = 44/73 (60.27%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  118 PVKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 336
            P   N   N   KE+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDT                GAKAKTNFP
Sbjct:   10 PATTNQTHNN-AKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.057e-17
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 1
Query:  142 NGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLPSEN 351
            NG VKE+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+                G KAKTNFP+ S +
Sbjct:   20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSS 89          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.811e-17
Identity = 42/68 (61.76%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  139 SNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPLP 342
            S    +EVH+RGVRKRPWGRYAAEIRDP KK+RVWLGTFDT                G KAKTNFP P
Sbjct:    3 STTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSP 70          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.415e-16
Identity = 49/82 (59.76%), Postives = 51/82 (62.20%), Query Frame = 1
Query:   91 MAPREKASGPVKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFP 336
            MAP  K +  VK N   NG    V +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT                GAKAKTNFP
Sbjct:    1 MAPTVKTAA-VKTN-EGNG----VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15
Identity = 40/67 (59.70%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  139 SNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNFPL 339
            + G VKE  +RGVRKRPWGR+AAEIRDP KKSRVWLGTFD+                G KAKTNFP+
Sbjct:   18 AGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPI 84          
BLAST of CK938965 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.737e-15
Identity = 39/72 (54.17%), Postives = 44/72 (61.11%), Query Frame = 1
Query:  118 PVKVNGNSNGIVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTXXXXXXXXXXXXXXXXGAKAKTNF 333
            P     + +   KE+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDT                G KAKTNF
Sbjct:   15 PTNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86          
The following BLAST results are available for this feature:
BLAST of CK938965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
ERF4_NICSY1.085e-2261.80Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF80_ARATH1.567e-2155.21Ethylene-responsive transcription factor 9 OS=Arab... [more]
ERF4_TOBAC7.774e-2159.14Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF3_TOBAC6.160e-1857.69Ethylene-responsive transcription factor 3 OS=Nico... [more]
ERF78_ARATH2.341e-1760.27Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF82_ARATH3.057e-1760.00Ethylene-responsive transcription factor 3 OS=Arab... [more]
ERF81_ARATH6.811e-1761.76Ethylene-responsive transcription factor 12 OS=Ara... [more]
ERF76_ARATH4.415e-1659.76Ethylene-responsive transcription factor 11 OS=Ara... [more]
ERF83_ARATH2.191e-1559.70Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF79_ARATH3.737e-1554.17Ethylene-responsive transcription factor 8 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004436_A07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938965 ID=CK938965; Name=CK938965; organism=Citrus sinensis; type=EST; length=885bp
GGGGGCGTCCCCNNNTCCTTTTATGTTTTGTCACTCGCTCAAAACAACAA
ACACTACCCACTTGAAATAAAAATATAATACGGAAATAATATGGCGCCGA
GAGAGAAGGCGTCGGGACCTGTAAAAGTTAACGGAAACAGTAACGGTATT
GTTAAAGAGGTGCATTTTAGGGGCGTTAGAAAGAGGCCGTGGGGTCGATA
TGCAGCCGAGATTAGGGATCCCGGCAAGAAGAGCCGTGTTTGGCTTGGAA
CCTTCGACACCGCTGAAGAAGCCGCTCGGGCCTACGACGCTGCTGCTAGA
GAATTTCGCGGCGCCAAGGCTAAAACAAACTTCCCCTTGCCTTCTGAAAA
TGTAACCAACAAAATTAGTCACAACAATATCAACATCAACAATAATAACC
AGAGCCCCAGCCAAAGTAGTACCATAGAGTCTTCAAGCCGCGAGCCGGCT
CTGATGATCGATTCGTCGCCGTTAGATCTCAATCTTGGTCCGGCTTGCGC
CGGCGGTGGTGCCGGTGGAGGATTTAACGCCACCGTTCGGTTTCCCTTCC
AGCCTGTGGGGGGTGCTTTCGGTGCGGCGAACCAGGTGTTTTATTTTGAT
CCGGTAGCTGCGATGAAGAGTCAGCAGTATCAACGGCTCAGGTTCGACCA
TCACCGGAATTATAATTTTCATGCGGCGGCGGTGACGGCGGTCGGTGACG
GAAGTGTGCAGAGCGACTCTGACTCATCATCCATTGTCGATTTGAACCAT
CACGATGATAAGCCACTCAGAGTTCTTGATATTGATCTTAATCTTCCACC
GGAAGATTTCGCCTGATACTTTTGCCGATGAATACACGATCATCGGAGAT
CGTCGGAAATTTCCTTTCATGATCATATTTTTAGC
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