CX675580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: AFB2_ARATH (Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana GN=AFB2 PE=1 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 3.306e-79 Identity = 149/203 (73.40%), Postives = 164/203 (80.79%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD---QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 600 LYFCQQMTNAAL+TVAKN NF RFRLCIL+ KPD VT QPLDEGFGAIV++CK TDQVFLYIGMYA QLEMLSIAFAG++DKGMLYVLNGCKK++KLEIRDSPFG+TALL DV KYETMRSLWMSSCEVTL GC+ LA+K P LNVEIINE+D E + RQKV K+YLYRT+VG R DAP FVW L Sbjct: 373 LYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKLYLYRTVVGTRMDAPPFVWIL 575
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: AFB3_ARATH (Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana GN=AFB3 PE=1 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.641e-78 Identity = 146/200 (73.00%), Postives = 164/200 (82.00%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD---QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 591 LYFC+QMTNAALI VAKN NF RFRLCIL+ KPD +T Q LDEGFGAIVQ+CK TDQVFLYIGMYAEQLEMLSIAFAG++DKGMLYVLNGCKK+RKLEIRDSPFGN ALL DVG+YETMRSLWMSSCEVTLGGC+ LA+ PRLNVEIINE++ + D+R+KV K+YLYRT+VG RKDAP +V Sbjct: 375 LYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: TIR1B_ORYSJ (Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica GN=Os04g0395600 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.295e-72 Identity = 137/200 (68.50%), Postives = 156/200 (78.00%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDD---QMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFV 591 LYFC QMTNAAL+TVAKN NFTRFRLCIL+ KPD VT QPLDEGFGAIV+ CK TD+VF+YIG YA+QLEMLSIAFAG+SDKGM++V+NGCK LRKLEIRDSPFG+ ALL + +YETMRSLWMSSC VTL GCQ LA KMP LNVE+INE D +ME + D KV K+Y+YRT G R DAP+FV Sbjct: 373 LYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFGAIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRKLEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSNEMEENHGDLPKVEKLYVYRTTAGARDDAPNFV 572
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: TIRC_ORYSJ (Transport inhibitor response 1-like protein Os11g0515500 OS=Oryza sativa subsp. japonica GN=Os11g0515500 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 4.952e-67 Identity = 125/201 (62.19%), Postives = 153/201 (76.12%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQME--FSLDDRQKVGKMYLYRTLVGPRKDAPDFVWT 597 LYFCQ+MTN+ALITVAKN FT FRLC+LD D VT QPLDEG+GAIVQSCK TD VFLYIGMYAE+LEMLS+AFAG++D GM YVLNGCK L+KLEIRDSPFG++ALL + +YE MRSLW+SSC VTLGGC++LA M LN+E++N + + +D +KV K+Y+YRT+ GPR DAP+F+ T Sbjct: 367 LYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSCKGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDSPFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNANDAKKVKKLYIYRTVAGPRGDAPEFIST 567
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: TIR1_ARATH (Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana GN=TIR1 PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 1.823e-61 Identity = 114/200 (57.00%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 600 LYFC+QMTNAALIT+A+N N TRFRLCI++ + PD +T++PLD GFGAIV+ CK TD+VF YIG YA+++EMLS+AFAG+SD GM +VL+GC LRKLEIRD PFG+ ALL + K ETMRSLWMSSC V+ G C+ L +KMP+LNVE+I+E + S + V ++++YRT+ GPR D P FVW + Sbjct: 378 LYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPD-SRPESCPVERVFIYRTVAGPRFDMPGFVWNM 576
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: TIR1A_ORYSJ (Transport inhibitor response 1-like protein Os05g0150500 OS=Oryza sativa subsp. japonica GN=Os05g0150500 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.217e-58 Identity = 113/192 (58.85%), Postives = 140/192 (72.92%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQM--EFSLDDRQKVGKMYLYRTLVGPR 570 LYFC++MTN ALIT+AKN NFT FRLCIL+ PD +T +PLD GF AIV+SC+ TD VF IG +A++LEMLSIAFAGNSD G+ Y+L+GCK L+KLEIRD PFG+ LL + K ETMRSLWMSSC +TLG C+ LA+KMPRL+VEI+N+ + SL D V K+Y+YRT+ GPR Sbjct: 389 LYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPRLSVEIMNDPGRSCPLDSLPDETPVEKLYVYRTIAGPR 580
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: GRH1_ARATH (GRR1-like protein 1 OS=Arabidopsis thaliana GN=GRH1 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 8.200e-54 Identity = 102/200 (51.00%), Postives = 138/200 (69.00%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 600 LYFC Q TNAAL T+A+ N FRLC+++ PD T +PLD+GF AI + C+ +D+ F YIG +A+++ MLSIAFAG+SD + ++L+GC+ L+KLEIRD PFG+TALL K ETMRSLWMSSC V+ G C+ L++KMPRLNVE+I D+ S + V ++Y+YRT+ GPR D P+FVWT+ Sbjct: 374 LYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVI--DEHPPESRPESSPVERIYIYRTVAGPRMDTPEFVWTI 571
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: TIR1L_ARATH (Transport inhibitor response 1-like protein OS=Arabidopsis thaliana GN=At5g49980 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.309e-51 Identity = 100/200 (50.00%), Postives = 136/200 (68.00%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 600 LYFCQ+MTNAA+I +++N T FRLCI+ R +PD VT +P+DEGFGAIV++CK TDQ F Y+G Y + + LS+AFAG+SD + +VL GC +L+KLEIRDSPFG+ AL + + +Y MR +WMS+C ++ G C+ +A+ MP L VE+I DD D+R V +Y+YR+L GPR DAP FV L Sbjct: 424 LYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDD----DNRDYVETLYMYRSLDGPRNDAPKFVTIL 619
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: FBX14_ARATH (F-box protein FBX14 OS=Arabidopsis thaliana GN=FBX14 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.469e-50 Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 1 Query: 1 LYFCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXXTDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINEDDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 600 LYFCQ MTN A+ +++N T FRLCI+ R +PD VT +P+D+GFGAIV++CK TD+ F YIG Y + + LS+AFAGNSDK + YVL GC KL+KLEIRDSPFG+ L + + +Y MR +W+SSC ++ GGC+ ++ +P + VE+ D + V +YLYR+L GPRKDAP FV L Sbjct: 424 LYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRSLDGPRKDAPKFVTIL 623
BLAST of CX675580 vs. ExPASy Swiss-Prot
Match: COI1_ARATH (Coronatine-insensitive protein 1 OS=Arabidopsis thaliana GN=COI1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16 Identity = 55/205 (26.83%), Postives = 92/205 (44.88%), Query Frame = 1 Query: 7 FCQQMTNAALITVAKNNSNFTRFRLCILDREKPDPVTMQPLDEGFGAIVQSCKXXXXXXXXXXX---TDQVFLYIGMYAEQLEMLSIAFAGNSDKGMLYVLNGCKKLRKLEIRDSPFGNTALLTDVGKYETMRSLWMSSCEVTLGGCQTLAKKMPRLNVEIINE----DDQMEFSLDDRQKVGKMYLYRTLVGPRKDAPDFVWTL 600 + +TN +L ++ N FRL +LDRE + +T PLD G +++ CK TD YIG Y+ + + + + G SD+G++ GC L+KLE+R F A+ V K ++R LW+ ++ G + P N+E+I + + + + + + Y +L G R D P V L Sbjct: 386 YVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588 The following BLAST results are available for this feature:
BLAST of CX675580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675580 ID=CX675580; Name=CX675580; organism=Citrus sinensis; type=EST; length=615bpback to top |