CX675572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675572 vs. ExPASy Swiss-Prot
Match: DAPB2_ARATH (Dihydrodipicolinate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=DAPB2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.603e-32 Identity = 42/51 (82.35%), Postives = 49/51 (96.08%), Query Frame = -3 Query: 87 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 239 VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++SKA+K I NMIDVLREGNM+ Sbjct: 299 VSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRSKAEKRIYNMIDVLREGNMR 349 HSP 2 Score: 71.633 bits (174), Expect = 1.603e-32 Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = -2 Query: 241 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 372 PG F+GY L+V+ESHQA KLD SGTAKAVIS FQKL VS+DMDQ Sbjct: 218 PGAFAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMDQ 261
BLAST of CX675572 vs. ExPASy Swiss-Prot
Match: DAPB1_ARATH (Dihydrodipicolinate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=DAPB1 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.727e-31 Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = -3 Query: 87 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 239 VSF+FQHNVCGRSIYAEGTVDA+LFL+KK++ KAD+ I NMIDVLREGNM+ Sbjct: 297 VSFEFQHNVCGRSIYAEGTVDAVLFLAKKIRLKADQRIYNMIDVLREGNMR 347 HSP 2 Score: 70.4774 bits (171), Expect = 1.727e-31 Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = -2 Query: 241 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 372 PG FSGY L V+ESHQA KLD SGTAKAVIS FQ+L VS+DMDQ Sbjct: 216 PGAFSGYSLDVMESHQASKLDASGTAKAVISCFQELGVSYDMDQ 259
BLAST of CX675572 vs. ExPASy Swiss-Prot
Match: DAPB1_ORYSJ (Probable dihydrodipicolinate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.390e-29 Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = -3 Query: 87 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 239 VSF+FQHNVCGRSIYAEGTVDA LFL KK+QS A+K + +MIDVLREGNM+ Sbjct: 293 VSFEFQHNVCGRSIYAEGTVDAALFLHKKIQSGANKKLYDMIDVLREGNMR 343 HSP 2 Score: 66.2402 bits (160), Expect = 3.390e-29 Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = -2 Query: 241 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 372 PG FSGY L+V+ESHQA KLD SGTAKAVIS FQKL VSF++++ Sbjct: 212 PGAFSGYKLEVMESHQATKLDISGTAKAVISCFQKLGVSFNLNE 255
BLAST of CX675572 vs. ExPASy Swiss-Prot
Match: DAPB2_ORYSJ (Probable dihydrodipicolinate reductase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB2 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 4.748e-28 Identity = 36/51 (70.59%), Postives = 44/51 (86.27%), Query Frame = -3 Query: 87 VSFQFQHNVCGRSIYAEGTVDALLFLSKKVQSKADKCISNMIDVLREGNMQ 239 VSF+FQHNVCGRSIYAEG+VDA +FL +KV+S K I +MIDVLREG+M+ Sbjct: 275 VSFEFQHNVCGRSIYAEGSVDAAMFLHRKVRSNDSKRIYDMIDVLREGSMR 325 HSP 2 Score: 70.0922 bits (170), Expect = 4.748e-28 Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = -2 Query: 241 PGGFSGYFLQVLESHQAGKLDTSGTAKAVISSFQKLRVSFDMDQ 372 PG FSGY L+VLESHQAGKLD SGTAKAVI+ F+KL VS+DM++ Sbjct: 194 PGAFSGYHLEVLESHQAGKLDISGTAKAVIACFEKLGVSYDMNR 237 The following BLAST results are available for this feature:
BLAST of CX675572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675572 ID=CX675572; Name=CX675572; organism=Citrus sinensis; type=EST; length=940bpback to top |