CK938880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34 Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 MAS DVE+RCFVGGLAWAT D +L AFS YG++L+SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+I VNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.431e-34 Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 A+VE+RCFVGGLAWAT D SL +AFS +GDI +SKIINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNI VNEAQ Sbjct: 2 AEVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.440e-34 Identity = 67/85 (78.82%), Postives = 78/85 (91.76%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 MAS DVE+RCFVGGLAWAT D +L AF+ YGD+++SKIINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+I VNEAQ Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.211e-33 Identity = 67/85 (78.82%), Postives = 78/85 (91.76%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 MAS DVE+RCFVGGLAWAT + SL AFS +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+I VNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.298e-31 Identity = 63/85 (74.12%), Postives = 74/85 (87.06%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 MA+ADVE+RCFVGGLAWAT++ SL AF++YG+IL+SK+I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNI VN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.253e-30 Identity = 62/82 (75.61%), Postives = 70/82 (85.37%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 ADVE+RCFVGGL WAT D SL AFS YGD+++SKII DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNI VNEAQ Sbjct: 2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30 Identity = 60/82 (73.17%), Postives = 71/82 (86.59%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 ++VE+RCFVGGLAWAT D L FS +GD+++SKIINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR I VNEAQ Sbjct: 2 SEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30 Identity = 59/82 (71.95%), Postives = 72/82 (87.80%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 ++VE+RCFVGGLAWAT D+ L FS +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR I VNEAQ Sbjct: 2 SEVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.061e-29 Identity = 59/85 (69.41%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 MA+ADVE+RCFVGGLAWAT + +L +AF+ +G +++SK+I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNI VN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CK938880 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 140 SSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNIAVNEAQ 331 +SLH AFS YG++LESKII DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNI VNEAQ Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of CK938880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938880 ID=CK938880; Name=CK938880; organism=Citrus sinensis; type=EST; length=700bpback to top |