CX675568

Overview
NameCX675568
Unique NameCX675568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.234e-66
Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = -1
Query:  200 RLGRREADIKNKMITPP---LKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVRTE 784
            RLGRRE+DIKN+   PP   LKN EGL   K+     S   +     +D +LSWKD++WL++IT LPIL+KG+LT EDA  A++ G AGIIVSNHGARQLDY PATISALEEVV A +GR+P+ +DGGVRRGTDVFKALALGA  + IGRPVV+ LAA+GE GVR+V++ML+DEFELTMAL+GC S+K I+R H+ TE
Sbjct:  160 RLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTE 357          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.234e-66
Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = -1
Query:  200 RLGRREADIKNKMITPP---LKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVRTE 784
            RLGRRE+DIKN+   PP   LKN EGL   K+     S   +     +D +LSWKD++WL++ITN+PIL+KG+LT EDA  A++ G AGIIVSNHGARQLDY PATISALEEVV A +GRVP+ +DGGVRRGTDVFKALALGA  + IGRPVV+ LAA+GE GV++V++ML+DEFELTMAL+GC S+  ITR H+ TE
Sbjct:  160 RLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTE 357          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.185e-65
Identity = 123/198 (62.12%), Postives = 154/198 (77.78%), Query Frame = -1
Query:  200 RLGRREADIKNKMITPP---LKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVRTE 784
            RLGRREADIKN+ + PP   LKN EG+   K+     S   +     +D SLSWKD+ WL++IT+LPIL+KG++T EDA  AV+ G AGIIVSNHGARQLDY PATI ALEEVV A +GR+P+ +DGGVRRGTDVFKALALGA  V IGRPVV+ LAA+GE GV++V++M++DEFELTMAL+GC S+K I+R H+  +
Sbjct:  160 RLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAAD 357          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.931e-50
Identity = 101/198 (51.01%), Postives = 142/198 (71.72%), Query Frame = -1
Query:  206 LGRREADIKNKMITPPLKNLEGLLSTKVSSDTGSNFEADAN------ETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVR 781
            LG R  D++N+   PP   ++   ++ +S     NF  D+       + +D S+SW+D++WLR +T+LPI+ KGIL  +DA +AV+ G+ GI+VSNHGARQLD  PATI  L E+V AV+G+V + +DGGVR+GTDV KALALGA+AV +GRP+V+GLA +GE GV+ V+E+LK+EF L MAL+GC +VK I +  VR
Sbjct:  164 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVR 361          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.527e-50
Identity = 100/198 (50.51%), Postives = 140/198 (70.71%), Query Frame = -1
Query:  206 LGRREADIKNKMITPPLKNLEGLLSTKVSSDTGSNFEADAN------ETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVR 781
            LG R  D++N+   PP   ++   +  ++     NF  ++       + +D SLSW D+ WLR +T+LPI++KGIL  +DA +AV+ GV GI+VSNHGARQLD  PATI  L E+V AV+G+V + +DGGVR+GTDV KALALGA+AV +GRP+++GLA +GE GV+ V+E+LK+EF L MAL+GC +VK I +  VR
Sbjct:  164 LGNRIDDVRNRFKLPPQLRMKNFETNDLAFSPKGNFGDNSGLAEYVAQAIDPSLSWDDITWLRRLTSLPIVVKGILRGDDAKEAVKHGVDGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVR 361          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.664e-45
Identity = 97/189 (51.32%), Postives = 131/189 (69.31%), Query Frame = -1
Query:  218 RLGRREADIKNKMITPPLKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITR 784
            ++G R  DI N++    +K L  LL    S + G+         +D S+ W+DL W +S+T LPI++KGILT+EDA  AV+  V GIIVSNHG RQLD  PA+I AL EVV AVKG+V + +DGG+R G DV KALALGA+ V +GRP+++GLA KGE+GV+ V+++LK+EF  +M LTGC SV  I +
Sbjct:  161 KVGNRRNDITNQVDL--MKKL--LLKDLGSPEMGNVMPYFQMSPIDPSICWEDLSWFQSMTRLPIILKGILTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEINQ 345          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.099e-44
Identity = 97/191 (50.79%), Postives = 127/191 (66.49%), Query Frame = -1
Query:  206 GRREADIKNKMITPPLKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVR 778
            G R  DI+N++     +NL   L+   S   G+         +  SL W DL W +SIT LPI++KGILT+EDA  AV+  V GIIVSNHG RQLD   A+I AL EVV AVKG++ + +DGGVR G DV KALALGA+ + +GRP+++GLA KGE+GV+ V+ +L +EF  +MALTGC SV  I R  V+
Sbjct:  163 GNRRHDIRNQL----RRNLT--LTDLQSPKKGNAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRNLVQ 347          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.470e-43
Identity = 95/205 (46.34%), Postives = 129/205 (62.93%), Query Frame = -1
Query:  188 LGRREADIKNKMITP---PLKNLEGLLSTKVSSDTGSNFEADANE----TMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHITRKHVRTEQERI 781
            LG+R AD KN    P    LK  E L+         SN +   N+     +D SL+W DL+WL+SIT LPIL+KGI+  +DA  A++ G  GIIVSNHG RQLD  P+TI  L  +   V+GRVP+++DGG+RRGTDV KALA GA AV IGRP+++GL+  G+ GV +V+ +L  E +L MALTG  ++  I    +  + + I
Sbjct:  190 LGKRTADFKNSFKLPNGLSLKIFEKLML--------SNLDGGLNQYIATMIDPSLTWNDLKWLKSITKLPILVKGIMCPKDAELALQYGADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLLNSELQLAMALTGITNISDINNSIIWDQNKYI 386          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.248e-41
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = -1
Query:  221 EADIKNKMITPPLKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIT 769
            EA+IK K +  P ++  GL  T +S  + S+              W DL  L+S+T LPI++KGILT+EDA  AV+  + GIIVSNHG RQLD  PA+I AL EVV AV G++ + MDGGVR G DV KALALGA+ + +GRP+++GLA KGE GV+ V+++LK+E    MAL+GC SV  I+
Sbjct:  176 EANIKLKDLRSPGESKSGL-PTPLSMPSSSS-------------CWNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEIS 344          
BLAST of CX675568 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.540e-41
Identity = 93/190 (48.95%), Postives = 122/190 (64.21%), Query Frame = -1
Query:  221 LGRREADIKNKMITPP---LKNLEGLLSTKVSSDTGSNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLDYSPATISALEEVVHAVKGRVPILMDGGVRRGTDVFKALALGAQAVLIGRPVVYGLAAKGEYGVRRVIEMLKDEFELTMALTGCPSVKHIT 781
            LG R  D +N++       LK+L  L   K +     +F         AS  W DL  L+SIT LPI++KGILT+EDA  A++  V GI+VSNHG RQLD   A+I AL EVV AVKG++ + MDGGVR GTDV KALALGA+ + +GRP+++GLA KGE GV+ V+++L  E    M L+GC SV  I+
Sbjct:  162 LGNRRRDKRNQLNLEANILLKDLRALKEEKPTQSVPVSFPK-------ASFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEIS 344          
The following BLAST results are available for this feature:
BLAST of CX675568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX2_ARATH2.234e-6663.64Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH2.234e-6663.64Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
GOX_SPIOL7.185e-6562.12Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
HAOX1_HUMAN2.931e-5051.01Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE8.527e-5050.51Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX2_BOVIN1.664e-4551.32Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
HAOX2_HUMAN4.099e-4450.79Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX_DICDI3.470e-4346.34Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_MOUSE3.248e-4150.27Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
HAOX2_RAT5.540e-4148.95Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_63B07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-63B07-C13-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675568 ID=CX675568; Name=CX675568; organism=Citrus sinensis; type=EST; length=784bp
TACCGCCCCCCCCCCTTTTTTTTTTAATACCAAATGTTGTATAATATTAT
TATAATTCAATACTAATACAATACAAAATAATACAATACAACTGTATTAA
AATAATACAATACAACATAATATAATAGAGTGTGTCAAACGCACCCTTAA
ACATTTCTGCAACAGAATAATATTACAGCATCGAATGGATTCTCTCCTGC
TCAGTTCTCACATGCTTCCTGGTAATATGTTTCACACTAGGACAGCCAGT
AAGGGCCATGGTCAACTCAAACTCATCCTTCAGCATTTCGATGACGCGTC
TCACCCCATATTCCCCTTTTGCAGCAAGGCCGTAGACTACAGGCCTTCCA
ATAAGTACAGCTTGTGCACCGAGGGCCAATGCCTTGAAAACATCTGTTCC
TCGCCGCACTCCTCCATCCATAAGAATTGGAACTCTTCCTTTAACGGCAT
GAACCACCTCTTCCAGAGCAGAAATAGTGGCAGGACTATAATCTAACTGT
CGAGCTCCGTGATTGGAGACAATAATCCCAGCAACACCTACTTCCACAGC
TTTTATTGCATCTTCACGAGTAAGTATCCCCTTGATCAAAATTGGTAAGT
TTGTAATAGATCTTAGCCATTCTAAATCCTTCCAACTTAAAGAAGCATCC
ATGGTCTCGTTGGCATCAGCTTCAAAATTCGAACCTGTATCAGAGCTGAC
TTTGGTTGATAAGAGGCCTTCCAAATTCTTCAACGGCGGTGTAATCATTT
TGTTCTTTATATCTGCCTCCCTTCTACCAAGTCT
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