CK938878

Overview
NameCK938878
Unique NameCK938878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:99..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 406.371 bits (1043), Expect = 1.027e-112
Identity = 206/244 (84.43%), Postives = 217/244 (88.93%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG----ASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMT LIPRNT IPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+ED+EHKKKVEAKNALENYAYNMRNTI+DEKI  KLP ADKKKIED+IE+AIQWL+GNQLAEADEFEDKMKELE ICNPIIAKMYQG G +AG    + MD+D            KIEEVD
Sbjct:  410 ETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAGGPGASGMDDD--APPASGGAGPKIEEVD 651          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 402.905 bits (1034), Expect = 1.135e-111
Identity = 197/222 (88.74%), Postives = 208/222 (93.69%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDED 711
            ETAGGVMTVLIPRNT IPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKI ITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVE+KNALENYAYNMRN +KDEKI AKL  ADKKKIE+AI+ +IQWLDGNQLAEADEF+DKMKELE ICNPIIAKMYQG G D G  M+++
Sbjct:  410 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDMGGGMEDE 631          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 4.314e-111
Identity = 203/240 (84.58%), Postives = 212/240 (88.33%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMTVLIPRNT IPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI VCFDIDANG LNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYK+ED+EHKKKVEAKNALENYAYNMRNTIKDEKI++KL   D+ KIEDAIE+AIQWLDGNQLAEA+EFEDKMKELE +CNPIIAKMYQG G D      +D            KIEEVD
Sbjct:  410 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQGAGGDM-----DDEGPAPSGGGAGPKIEEVD 644          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 399.823 bits (1026), Expect = 9.611e-111
Identity = 204/245 (83.27%), Postives = 216/245 (88.16%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG-GADAG----ASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMT LI RNT IPTKKEQVFSTYSDNQPGVLIQV+EGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTG+KNKITITNDKGRLSKE+IEKMVQEAEKYK+ED+EHKKKVEAKNALENYAYNMRNTI+DEKI  KLP ADKKK+ED+IEEAIQWLDGNQL EADEFEDKMKELE +CNPIIAKMYQGG G +AG    + MDED            KIEEVD
Sbjct:  410 ETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGGPGASGMDED-EAPPASGGAGPKIEEVD 653          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 2.367e-109
Identity = 203/244 (83.20%), Postives = 215/244 (88.11%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDED----XXXXXXXXXXXXKIEEVD 765
            ETAGG MTVLIPRNT IPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIE+MVQEAEKYK+ED+E KKKVEAKNALENYAYNMRNTIKD+KI+++L  ADKK+IEDAI+EAI+WLD NQLAEADEFEDKMKELE ICNPIIAKMYQGG    GA+MDED                KIEEVD
Sbjct:  410 ETAGGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGA--GGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.534e-108
Identity = 201/241 (83.40%), Postives = 212/241 (87.97%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGER-TRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMTVLIPRNT IPTKKEQVFSTYSDNQPGVLIQV+EGER  RTRDNNLLGKFELS IPPAPR VPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+E KKKVEAKN+LENYAYNMRNT+KDEKI +KL + DKKKIEDA+++AI WL+ NQLAE DEFEDKMKELEGICNPIIAKMYQG G DAG  MD+D            KIEEVD
Sbjct:  411 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERRARTRDNNLLGKFELSVIPPAPRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDD-APPSGGSSAGPKIEEVD 650          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 392.119 bits (1006), Expect = 2.004e-108
Identity = 201/242 (83.06%), Postives = 210/242 (86.78%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG--GADAGASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMTVLI RNT IPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+ED+EHKKKV+AKNALENYAYNMRNTI+DEKI  KL   DKKKIED+IE AI+WL+ NQLAE DEFEDKMKELE ICNPIIAKMYQGG  G  A   MDED            KIEEVD
Sbjct:  410 ETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAGGMDED--VPPSAGGAGPKIEEVD 649          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 391.734 bits (1005), Expect = 2.617e-108
Identity = 198/240 (82.50%), Postives = 208/240 (86.67%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMTVLIPRNT IPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI V FDID N ILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAED+E KKKV+AKNALENYAYNMRNTIKD+KI++KLP  DKKKIEDA++ AI WLD NQLAE +EFEDKMKELEGICNPIIAKMY G GA  GA+   D            KIEEVD
Sbjct:  406 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 3.911e-104
Identity = 190/240 (79.17%), Postives = 206/240 (85.83%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMTVLIPRNT IPTKKEQ+FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQ+NVCFDIDANGILNVSAEDKT G KNKITITNDKGRLSKEEIEKMV++AE+YKAED+E KKKVEAKN+LENYAYNMRNTIKDEKI  KL   +K+KIE A+E+AIQWL+GNQ+AE DEFEDK KELEGICNPIIAKMYQG    AG   D              KIEEVD
Sbjct:  409 ETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQGA---AGPGGDVPMGADMPAAGAGPKIEEVD 645          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 362.073 bits (928), Expect = 2.221e-99
Identity = 179/210 (85.24%), Postives = 192/210 (91.43%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 675
            ETAGGVMTVLIPRNT IPTKKEQVFSTYSD +PGVLIQV+EGERTRTRDNNLLGKFELSGIPPAPR VPQI VCFDIDAN  LNVSAEDKTTGQKNKITITNDKGRLSKE+IEKMVQE EKYKAED+E KKKV+ KNALENYAY+MRNTI D+KI++KLPT DKKKIED ++ AI  LDGNQL E +EFEDKMKELE +CNPIIAKMYQG
Sbjct:   18 ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDKEPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRDVPQITVCFDIDANWCLNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELESLCNPIIAKMYQG 227          
The following BLAST results are available for this feature:
BLAST of CK938878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH1.027e-11284.43Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7E_SPIOL1.135e-11188.74Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC4.314e-11184.58Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP72_ARATH9.611e-11183.27Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP7C_PETHY2.367e-10983.20Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_SOLLC1.534e-10883.40Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP73_ARATH2.004e-10883.06Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_MAIZE2.617e-10882.50Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN3.911e-10479.17Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_LUPPO2.221e-9985.24Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004437_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938878 ID=CK938878; Name=CK938878; organism=Citrus sinensis; type=EST; length=832bp
GGGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGGTTTGGAGAC
TGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCGCTATTCCAA
CCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTG
TTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTT
GCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTC
CACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAACGTT
TCCGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCACAAA
TGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAGAGG
CAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAGGCC
AAGAATGCTCTTGAGAATTATGCTTACAACATGAGAAACACAATCAAGGA
TGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGAAGAAAATTGAAG
ATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCAGAG
GCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCTGCAACCC
AATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATGCTGGTGCAAGTA
TGGATGAGGATGGTCCTTCTGCAGGTGCTGGTAGCGGTGCTGGCCCCAAG
ATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAATGTTGTTTAATG
ATTAGGGGTTGAGTTGGGGAGTGTGATCTTTT
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