CK938830

BLAST of CK938830 vs. ExPASy Swiss-Prot
Match: EXOS3_DICDI (Putative exosome complex exonuclease rrp40 OS=Dictyostelium discoideum GN=exosc3 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.821e-44
Identity = 97/211 (45.97%), Postives = 132/211 (62.56%), Query Frame = 2

Query:  134 LVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNK-YWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSE 763
            L D+ VVPGDV+  +  +    +++G GL Q  D+V   KAG LR+SK ++ YW+E+ QKRYVP VED V+G +++  A++F VDI     A L   +FEG T+ N P   +G+L+Y RV  AN  M PE+ C     KA  FG L  GYM   S GLS  LLS   C +L+ LGK + +EIAVG+NGRVW+N+ S    ++VSN I NS+
Sbjct:    4 LKDQFVVPGDVIGKIGDLK---VRIGPGLLQTKDTVLATKAGVLRYSKFHRFYWIENEQKRYVPQVEDMVIGTIIEKHAESFKVDIGSSCSALLSAYSFEGATKSNKPLLNVGNLIYCRVTVANRDMEPEVVCLSQKQKAEGFGQLIGGYMLNCSLGLSHYLLSE-DCFLLQILGKHIPYEIAVGVNGRVWINSGSNHNTIVVSNTIYNSQ 210          

BLAST of CK938830 vs. ExPASy Swiss-Prot
Match: EXOS3_MOUSE (Exosome complex exonuclease RRP40 OS=Mus musculus GN=Exosc3 PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37
Identity = 88/225 (39.11%), Postives = 134/225 (59.56%), Query Frame = 2

Query:  137 VDKIVVPGDVVLDLSSMTNQTIKL--GGGLRQECDSVSVIKAGKLRFSKPNK-----YWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLL-KDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQK 787
            VD +   G+  L L++     +++  G GLR+  D + V K G+LR  +P+      YWV+S QKRYVP   D V+GIV+    D F VD+ G   A L  LAFEG T+RN P  ++G L+Y + V AN  M PE+ C D+ G+A   G++ +DG +F+ + GL R LL +P C +++ELGK    EI  G+NGR+WV A++    ++++N +   E ++  Q+K
Sbjct:   42 VDGLGGAGEQPLRLNAGARPRLRVVCGPGLRRCGDRLLVTKCGRLRHKEPSGGGGGVYWVDSQQKRYVPVKGDHVIGIVIAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQCVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLL-APDCEIVQELGKLYPLEIVFGMNGRIWVKAKTIQQTLILANVLEACEHMTTEQRK 265          

BLAST of CK938830 vs. ExPASy Swiss-Prot
Match: EXOS3_BOVIN (Exosome complex exonuclease RRP40 OS=Bos taurus GN=EXOSC3 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.429e-37
Identity = 85/213 (39.91%), Postives = 127/213 (59.62%), Query Frame = 2

Query:  170 LDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNK------YWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLL-KDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQK 787
            L+ ++ +   +  G GLR+  D + V K G+LR  +P        YWV+S QKRYVP   D V+GIV     D F VD+ G   A L  LAFEG T+RN P  ++G L+Y + V AN  M PE+ C D+ G+A   G++ +DG +F+ + GL R LL +P C +L+E+GK    EI  G+NGR+WV A++    ++++N +   E ++A Q+K
Sbjct:   55 LNAAARSRGRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLL-APDCEILQEVGKLYPLEIVFGMNGRIWVKAKTIQQTLILANILEACEHMTADQRK 266          

BLAST of CK938830 vs. ExPASy Swiss-Prot
Match: EXOS3_HUMAN (Exosome complex exonuclease RRP40 OS=Homo sapiens GN=EXOSC3 PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 7.839e-36
Identity = 82/213 (38.50%), Postives = 126/213 (59.15%), Query Frame = 2

Query:  170 LDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNK------YWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRVVKANPGMNPELSCTDASGKAAEFGLL-KDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQK 787
            L+  + +   +  G GLR+  D + V K G+LR  +P        YWV+S QKRYVP   D V+GIV     D F VD+ G   A L  L+FEG T+RN P  ++G L+Y + V AN  M PE+ C D+ G+A   G++ +DG +F+ + GL R LL +P C +++E+GK    EI  G+NGR+WV A++    ++++N +   E +++ Q+K
Sbjct:   55 LNARACSRVRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLL-APDCEIIQEVGKLYPLEIVFGMNGRIWVKAKTIQQTLILANILEACEHMTSDQRK 266          

BLAST of CK938830 vs. ExPASy Swiss-Prot
Match: RRP40_SCHPO (Exosome complex component rrp40 OS=Schizosaccharomyces pombe GN=rrp40 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.337e-35
Identity = 94/229 (41.05%), Postives = 133/229 (58.08%), Query Frame = 2

Query:  155 PGDVVLDLSSMTNQTIKLGGGL----RQECDSVSVIKAGKLRFSKPNKYWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRVVKANPGMNPELSCTDA-SGKAAEFGLLKDGYMFETSTGLSR---MLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVXXLLQRI 817
            PG+ + D     + +I+LG GL    +   + + V KAG+L  +  N   ++S  KRY+P   D V+G ++   A+ + VDI    IA L  LAFE  TR++ P   +GSL+Y RV  A+  M PEL C DA +GKAA +G LK+GYM    TGLS      L  P   +L+ LG  + FEIAVG+NGRVWVN+E+ ST VL+  AI N E +S  +Q      L++++
Sbjct:   15 PGERIPDSIISQDGSIRLGPGLVFQKKDREEEIVVSKAGRLHQTGKNAMLIDSRTKRYIPATNDQVIGQIISRFAEGYRVDIGSAHIAQLNALAFENVTRKSRPNLNVGSLVYARVSLADRDMEPELECFDATTGKAAGYGELKNGYMI---TGLSLSHCRKLILPKNTLLQTLGSYIPFEIAVGMNGRVWVNSENLSTTVLICTAIRNCEFMSDEEQIKYCKDLIKKL 240          

BLAST of CK938830 vs. ExPASy Swiss-Prot
Match: RRP40_YEAST (Exosome complex component RRP40 OS=Saccharomyces cerevisiae GN=RRP40 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.416e-23
Identity = 62/196 (31.63%), Postives = 105/196 (53.57%), Query Frame = 2

Query:  200 IKLGGGLRQECD----SVSVIKAGKLRFSKPNKYWVES-----SQKRYVPCVEDTVLGIVVDCKADNFFVDIRG-PTIAFLPVLAFEGGTRRNIPKFEIGSLLYVRVVKANPGMNPELSCTDAS-GKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIM 754
            +KLG G+   CD     +  +  G L  S   K  V++     S KRY+P V D V+G+++   +D++ V ++   +   L  +AF   +++N P  ++G L+Y RV  A   +  E+ C D++ G+ A FG+L+DG + + +   +R LL +   P+L+ L     FE+A+GLNG++WV  E  S  +     IM
Sbjct:   19 VKLGPGIY--CDPNTQEIRPVNTGVLHVSAKGKSGVQTAYIDYSSKRYIPSVNDFVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFPNASKKNRPTLQVGDLVYARVCTAEKELEAEIECFDSTTGRDAGFGILEDGMIIDVNFNFARQLLFNNDFPLLKVLAAHTKFEVAIGLNGKIWVKCEELSNTLACYRTIM 212