CN187883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.978e-42 Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = -2 Query: 251 IAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRLFAESRNQSGDG 532 IAGGLCDNLLTCI+RAWDY KPLFVAPAMNT MWNNPFTERHL+S+DELGI+LIPP+ KRLACGDYGNGAMAEPSLIYSTVRLF ES+ G Sbjct: 113 IAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFWESQAHQQTG 206
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.292e-41 Identity = 77/88 (87.50%), Postives = 84/88 (95.45%), Query Frame = -2 Query: 269 IAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRLFAESR 532 IAGGLCDNLLTCIVRAWDY+KPLFVAPAMNT MWNNPFTERHL+ +DELGI+LIPP+ K+LACGDYGNGAMAEPSLIYSTVRLF ES+ Sbjct: 105 IAGGLCDNLLTCIVRAWDYSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIYSTVRLFWESQ 192
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.465e-20 Identity = 44/82 (53.66%), Postives = 55/82 (67.07%), Query Frame = -2 Query: 287 IAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVR 532 +A G+CDNLLTC++RAWD NKPL PAMNT MW +P T + + + G IP VSK+L CGD G GAMAE I + V+ Sbjct: 111 VASGICDNLLTCVIRAWDLNKPLLFCPAMNTAMWEHPLTAQQVAQLKAFGYVEIPCVSKKLVCGDQGLGAMAEVETIVAKVQ 192
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.296e-18 Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = -2 Query: 287 IAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVR 532 +A G+CDNLLTC++RAWD +KPL PAMNT MW +P T + + + G IP V+K+L CGD G GAMAE I V+ Sbjct: 111 VASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVK 192
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: COAC_DICDI (Putative phosphopantothenoylcysteine decarboxylase OS=Dictyostelium discoideum GN=ppcdc PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.115e-18 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 290 AVLPPPAAADLIHLIS*LIAGGLCDNLLTCIVRAWDY-NKPLFVAPAMNTFMWNNPFTERHLMSIDEL--GISLIPPVSKRLACGDYGNGAMAE-PSLIYSTV 586 ++L P +A+ + IS GLCDNLLT ++RAWDY NK + +APAMNT MW NPFT +H+ ++ + + +I P+ K+L CGD G GAM + P ++ T+ Sbjct: 95 SILISPCSANTLGKIS----NGLCDNLLTSLIRAWDYKNKSMILAPAMNTMMWENPFTFKHIETLKSISPNVFIIDPIEKKLFCGDIGMGAMEQVPKIVDFTI 193
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: TYSY_SCHPO (Probable thymidylate synthase OS=Schizosaccharomyces pombe GN=SPAC15E1.04 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.386e-17 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = -2 Query: 314 IAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDEL--GISLIPPVSKRLACGDYGNGAMAE 532 +A GLCDNLLT ++RAW KP+ +APAMNT MW NP T+ HL +I + I P+ K LACGD G G MAE Sbjct: 127 MANGLCDNLLTSLIRAWAPLKPILLAPAMNTLMWTNPITQEHLSAISRIYKNSEFIMPIEKVLACGDIGMGGMAE 201
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: YKI8_YEAST (Uncharacterized protein YKL088W OS=Saccharomyces cerevisiae GN=YKL088W PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = -2 Query: 242 IAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSI--DELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRLFAESRNQSGDGKVG 532 +A G+C+NLLT ++R W P+ +APAMNTFM+ NP T++HL S+ D I ++ PV K L CGD G G M E + I VR ++ D + G Sbjct: 414 LANGICNNLLTSVMRDWSPLTPVLIAPAMNTFMYINPMTKKHLTSLVQDYPFIQVLKPVEKVLICGDIGMGGMREWTDIVEIVRRRINEIRKARDEETG 512
BLAST of CN187883 vs. ExPASy Swiss-Prot
Match: COAC_STRMU (Probable phosphopantothenoylcysteine decarboxylase OS=Streptococcus mutans GN=coaC PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11 Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = -2 Query: 290 VLPPPAAADLIHLIS*LIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTV 583 +L P +A L HL A G DN++T + A P F APAMNT M+ NP T+ ++ + + G I P S LACGD G+GA+A+ I + Sbjct: 83 LLAPASANTLAHL-----AHGFADNIVTSVALALPLEVPKFFAPAMNTKMYENPITQSNIALLKKFGYKEIQPKSSVLACGDVGSGALADLDTIIQKI 175 The following BLAST results are available for this feature:
BLAST of CN187883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187883 ID=CN187883; Name=CN187883; organism=Citrus sinensis; type=EST; length=791bpback to top |