CN187880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.324e-51 Identity = 101/161 (62.73%), Postives = 116/161 (72.05%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIP+FFG RR++V DPF+LDVWDPF+DFPFP+ SSA +F E SA V+ RVDWKETPEAHVFK D+PGL VLQISG+RN+EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G KAIEISG Sbjct: 1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.817e-49 Identity = 100/161 (62.11%), Postives = 115/161 (71.43%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIPSFFG RRS+V DPF+LDVWDPF+DFPF + SALS+ FP E SA V+ RVDWKETPEAHVFK DLPG+ VLQISG+R++EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KA+ME+G K I+ISG Sbjct: 1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNN---SALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.285e-49 Identity = 101/161 (62.73%), Postives = 112/161 (69.57%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIPSFFG RRSSV DPF+LDVWDPF+DFPFPS S+ E SA V+ RVDWKETPEAHVFK D+PGL VLQISG+RN+EKEDKNDTWHRVERSSG RRFRLPEN K+DQ+KASME+G KAI+ISG Sbjct: 1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSA--------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.900e-47 Identity = 98/161 (60.87%), Postives = 112/161 (69.57%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIPSFF RRS+V DPF+LDVWDP +DFPF + S+ S+ FP E A V+ RVDWKETPEAHVFK DLPGL VLQISG+R++EKEDKND WHRVERSSG F RRFRLPEN KMD++KASME+G K+IEISG Sbjct: 1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSN---SSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.788e-47 Identity = 98/161 (60.87%), Postives = 111/161 (68.94%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIPS FG RRS+V DPF+LDVWDPF+DF FP+ S+ E SA VN RVDWKETPEAHVF+ D+PGL VLQISG+RN+EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G KAIEISG Sbjct: 1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSA--------ENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.206e-46 Identity = 96/161 (59.63%), Postives = 111/161 (68.94%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIP FFG RRS+V DPF+LD+WDPF+DF P+ SA E SA V+ RVDWKETPEAHVFK D+PGL VLQISG+RN+EKEDKNDTWHRVERSSG F+RRFRLPEN K++++KASME+G KAIEISG Sbjct: 1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSA-------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.047e-45 Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = -1 Query: 144 MSLIPSFFGNRRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MS+IPSFFG RRS+V DPF+LDVWDPF+DFP + SSA S+F ET+A VN +DWKETP+AHVFK DLPGL VLQISG+RN EKE+KND WHRVERSSG F RRFRLPEN K+D++KA+M +G KAI+ISG Sbjct: 1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVT--SSA--SEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.347e-44 Identity = 94/162 (58.02%), Postives = 112/162 (69.14%), Query Frame = -1 Query: 144 MSLIPSFFGN-RRSSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MS+IPSFF N RRS++ DPF+LDVWDPF++ SS E SA+VNARVDW+ETPEAHVFK DLPGL VL+ISG+R++EKEDKNDTWHRVERSSG F+RRFRLPENVKMDQ+KA+ME+G K+I+ISG Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT---------SSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.298e-44 Identity = 89/140 (63.57%), Postives = 105/140 (75.00%), Query Frame = -1 Query: 213 MSLIPSFFGNRR--SSVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 626 MSLIPSFFGN R +S+ DPF+LDVWDPF++ FPS S ETSA+ NARVDWKET EAHVFK DLPG+ VL+ISG+R++EKE+K DTWHRVERSSG FSR+F+LPENVKMDQ+KASME+G Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG--------ETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132
BLAST of CN187880 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.334e-43 Identity = 95/162 (58.64%), Postives = 107/162 (66.05%), Query Frame = -1 Query: 144 MSLIPSFFGNRRS-SVSDPFALDVWDPFRDFPFPSGYSSALSSQFPPETSAVVNARVDWKETPEAHVFKTDLPGLXXXXXXXXXXXXXVLQISGQRNIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIEISG 626 MSLIP FG+RRS SV DPF++DV+DPF++ F S ETSA N R+DWKETPEAHVFK DLPGL VLQISG+RN+EKEDKNDTWHRVERSSG F RRFRLPEN KMDQ+KASME+G K+IEISG Sbjct: 1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSG--------ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154 The following BLAST results are available for this feature:
BLAST of CN187880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187880 ID=CN187880; Name=CN187880; organism=Citrus sinensis; type=EST; length=659bpback to top |