CK938777

Overview
NameCK938777
Unique NameCK938777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9438 contig Csv1_Contig9438:213..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK938777 vs. ExPASy Swiss-Prot
Match: YJ72_SCHPO (Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe GN=SPCC757.02c PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.816e-22
Identity = 82/298 (27.52%), Postives = 132/298 (44.30%), Query Frame = 2 
Query:   26 EAENCQINGAMFRNVLRSV-IPNAPNLRHICLQTGGKHYVGPFECIGKIPSHEPPYTEDLPRLNVPLFYYTQEDILFEEVEKREGLTWSIHRPFGIFGFSPYSLMNIVGTLCVYAAICKHEGFPLLFPGTKETWEGFSEYSDADLIAEQEIWAAVDPNARNEAFNCTNGDVFKWKHLWKVLAEQFEIE--------NYGFGDE------------------------KGSERVRLEEIMKGK--ESVWEEIVRENQLQPTKLNEVAVWSYADMVMNVGAGYSV--SMNKSKEHGFLGF 808
            E + C++NG M RN ++++ + +   LR + L TG K Y G      ++P  E            P FYY QEDIL +E    +   ++I  P  I G S  S MN   T+ +YA +C+    P  FPG ++ + GF + S + LIA+ ++W         E FN  NGD+  W   W  +AE F +E        ++    E                        K   ++ L++ +K K  +  W  I    +L    L EV  W++ D +   G  Y+V  SM+K+++ G+  +
Sbjct:   90 EEKLCEVNGNMLRNFVQALELTSIQTLRRVILTTGLKFY-GLHLGEVRLPMIETDIRVPETFSGTPNFYYVQEDIL-KEFSNGKKWDYTIAMPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFDDISYSKLIADFQLWMTFKAECSEEKFNIVNGDIHSWSRTWPKIAEYFGVEVPKNQFATDFTLSTEVTLSTPSPINLYEKELGIKHTPNSKIINQISLQQWVKQKKVQDAWRTIAEREKLNAHAL-EVGTWAFCDFLF--GRTYNVISSMSKARKLGYTDY 382
The following BLAST results are available for this feature:
BLAST of CK938777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJ72_SCHPO2.816e-2227.52Uncharacterized protein C757.02c OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004438_D08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938777 ID=CK938777; Name=CK938777; organism=Citrus sinensis; type=EST; length=823bp
GGGGACGTGGGCCAGCCGTCCCACTGAAGCCGAGAATTGCCAGATCAACG
GTGCAATGTTTCGTAACGTGCTCCGTTCTGTAATCCCGAACGCACCGAAT
CTCCGCCACATCTGTCTCCAAACGGGAGGCAAACATTACGTGGGTCCATT
CGAGTGTATTGGCAAGATACCGTCTCACGAACCTCCTTATACAGAGGATT
TGCCGAGGTTAAACGTACCACTTTTTTACTATACTCAAGAAGACATATTG
TTTGAAGAAGTTGAAAAAAGAGAGGGCTTGACTTGGTCCATACATCGACC
TTTCGGAATATTTGGGTTTTCACCTTATAGTTTGATGAATATTGTAGGCA
CTCTCTGCGTGTACGCTGCTATTTGCAAACATGAAGGTTTTCCTTTACTA
TTTCCTGGGACGAAAGAAACTTGGGAAGGCTTCTCAGAATATTCGGATGC
AGATTTGATTGCGGAGCAGGAAATTTGGGCGGCAGTGGATCCTAATGCAA
GAAACGAAGCTTTCAATTGCACCAATGGAGATGTTTTTAAGTGGAAGCAT
TTATGGAAAGTGTTGGCTGAGCAGTTTGAGATTGAGAATTATGGGTTTGG
AGATGAAAAGGGTAGTGAGAGGGTGAGATTGGAGGAAATTATGAAAGGTA
AAGAAAGTGTGTGGGAGGAGATTGTGAGAGAGAATCAGTTGCAGCCAACA
AAATTGAATGAGGTCGCTGTTTGGTCGTATGCAGATATGGTGATGAATGT
TGGTGCGGGTTATTCAGTTAGCATGAACAAGAGTAAGGAGCACGGGTTCC
TGGGTTTCAGGAATTCTAAGAAT
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