CN187870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_ARATH (Protein Dr1 homolog OS=Arabidopsis thaliana GN=DR1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.532e-53 Identity = 108/151 (71.52%), Postives = 119/151 (78.81%), Query Frame = -1 Query: 218 MEPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMQDSLKGGKWSNGXXXXXXXXXXXXXXXXXXXXXXMNGGAAGP-PKQPD 667 M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINLVSSESN+VC++EDKRTIAPEHVLKAL+VLGFGEYIEEVYAAYEQHK ETMQD+ + KW+ G MNGG + P P+ P+ Sbjct: 1 MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETMQDTQRSVKWNPGAQMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPE 151
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_DICDI (Protein Dr1 homolog OS=Dictyostelium discoideum GN=dr1 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.809e-28 Identity = 56/104 (53.85%), Postives = 80/104 (76.92%), Query Frame = -1 Query: 326 KEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMQDSLKGGKWSN 637 +++ SLPKAT++K+IKEMLP DV+ + + +DL++ECCVEFI+L+SSE+N++C RE KRTIA EHV+KAL LGF +Y ++V Y++HKLE S K+ N Sbjct: 8 EDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRTIAAEHVIKALTELGFSDYTQKVSDVYDKHKLEVSTKSKSSKKFEN 111
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_SCHPO (Negative cofactor 2 complex subunit beta OS=Schizosaccharomyces pombe GN=ncb2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.386e-24 Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = -1 Query: 332 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMQDSLKGGKW 646 G + ++ SLPKAT+ K++ ++LP D+ ++A+DLLIECCVEFI+LVSSE+NE+C +E K+TIA EH++KALE L F EYI E +HK + K K+ Sbjct: 4 GFADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKTIAAEHIIKALENLEFKEYIAEALEVAAEHKEQQKNREKKSSKF 108
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_RAT (Protein Dr1 OS=Rattus norvegicus GN=Dr1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22 Identity = 47/88 (53.41%), Postives = 71/88 (80.68%), Query Frame = -1 Query: 371 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 634 +D ++P+A + K+IKE LP +VRVA DA++L++ CC EFI+L+SSE+NE+C++ +K+TI+PEHV++ALE LGFG YI EV ++ K Sbjct: 9 DDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECK 95
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_MOUSE (Protein Dr1 OS=Mus musculus GN=Dr1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22 Identity = 47/88 (53.41%), Postives = 71/88 (80.68%), Query Frame = -1 Query: 371 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 634 +D ++P+A + K+IKE LP +VRVA DA++L++ CC EFI+L+SSE+NE+C++ +K+TI+PEHV++ALE LGFG YI EV ++ K Sbjct: 9 DDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECK 95
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_HUMAN (Protein Dr1 OS=Homo sapiens GN=DR1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22 Identity = 47/88 (53.41%), Postives = 71/88 (80.68%), Query Frame = -1 Query: 371 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 634 +D ++P+A + K+IKE LP +VRVA DA++L++ CC EFI+L+SSE+NE+C++ +K+TI+PEHV++ALE LGFG YI EV ++ K Sbjct: 9 DDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECK 95
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_CHICK (Protein Dr1 OS=Gallus gallus GN=DR1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22 Identity = 47/88 (53.41%), Postives = 71/88 (80.68%), Query Frame = -1 Query: 371 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 634 +D ++P+A + K+IKE LP +VRVA DA++L++ CC EFI+L+SSE+NE+C++ +K+TI+PEHV++ALE LGFG YI EV ++ K Sbjct: 9 DDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECK 95
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NC2B_DROME (Protein Dr1 OS=Drosophila melanogaster GN=NC2beta PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.645e-18 Identity = 44/88 (50.00%), Postives = 67/88 (76.14%), Query Frame = -1 Query: 371 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHK 634 ++ +LP+A++ KIIKE++P VRVA ++++L++ CC EFI+L+SSE+NEVC+ +K+TI EHVL+ALE LGF +Y +E A K Sbjct: 16 DELTLPRASINKIIKELVPT-VRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINAEHVLEALERLGFHDYKQEAEAVLHDCK 102
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NCB2_YEAST (Negative cofactor 2 complex subunit beta OS=Saccharomyces cerevisiae GN=NCB2 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.952e-14 Identity = 41/99 (41.41%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 350 EDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYI---EEVYAAYE-QHKLETMQDS 634 ++ SLPKAT+ K+I E+L D+ +DA++++I +EFI ++SS ++E+ E K+TIAPEHV+KALE L + E+I EE+ ++ K++ +DS Sbjct: 6 DNVSLPKATVQKMISEILDQDLMFTKDAREIIINSGIEFIMILSSMASEMADNEAKKTIAPEHVIKALEELEYNEFIPFLEEILLNFKGSQKVKETRDS 104
BLAST of CN187870 vs. ExPASy Swiss-Prot
Match: NFYB2_ORYSJ (Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp. japonica GN=NFYB2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 38/108 (35.19%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 323 GKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCSREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMQDSLKGGKWSNG 646 G ++D LP A +++I+K+ +PA+ ++A+DA++ L EC EFI+ V+SE+++ C +E ++TI E +L A+ LGF EY++ + +++ E + DS K +G Sbjct: 31 GVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYR-EVIGDSKLSSKAGDG 137 The following BLAST results are available for this feature:
BLAST of CN187870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187870 ID=CN187870; Name=CN187870; organism=Citrus sinensis; type=EST; length=733bpback to top |