CN187859

Overview
NameCN187859
Unique NameCN187859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7668 contig Csv1_Contig7668:146..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_HELMI (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=mraW PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.387e-27
Identity = 85/186 (45.70%), Postives = 104/186 (55.91%), Query Frame = -3
Query:  177 DAEVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 734
            + E+ R+LR+YGEE   + +   IV+ R    L  TGELVD+I++  P    +  G    A R FQALRIAVNDEL  LE +L A  + LAPGGRLAVISFHSLEDRIVK  F        E A G          D  V     R  +     KI+TK+P+  S EE R N R +SAKLR  +KI
Sbjct:  146 EGEIARILRDYGEERWAKRIAQFIVKRRALQPLERTGELVDIIRAAIPAAARQEGG--HPAKRTFQALRIAVNDELGALEEALPAALEALAPGGRLAVISFHSLEDRIVKSFF-------AEQARG-----CLCPPDFPVCACGNRPKV-----KIITKKPLVGSDEEMRANPRAQSAKLRAAEKI 312          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_PAESJ (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Paenibacillus sp. (strain JDR-2) GN=mraW PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.879e-26
Identity = 73/188 (38.83%), Postives = 103/188 (54.79%), Query Frame = -3
Query:  177 DAEVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 734
            + E+ R+L  YGEE   R +  KIV+AR    + +TGEL +L+++  P    R  G    A R FQALRIAVNDEL   E +L     C+ PGGR++VI+FHSLEDRI KQ F S ++      +                     + + G  GK  ++ ++PI P+ +E  +N R RSAKLRV +K+
Sbjct:  150 EREISRILHVYGEEKFARSIARKIVQARENAPIETTGELAELVKTGIPAAARRTGG--HPAKRSFQALRIAVNDELGAEEDALEEAVKCIRPGGRISVITFHSLEDRICKQLFASYVEKCTCPPD-------------------FPKCVCGGTGKLRLVNRKPIVPTEQELEVNPRSRSAKLRVAEKL 316          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_HELMO (S-adenosyl-L-methionine-dependent methyltransferase mraW (Fragment) OS=Heliobacillus mobilis GN=mraW PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.879e-26
Identity = 84/186 (45.16%), Postives = 105/186 (56.45%), Query Frame = -3
Query:  177 DAEVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 734
            + E+ R+L EYGEE   + +   IV  R    L ST +LVD+I++  P    +  G    A R FQALRIAVNDEL  L+ +L A  D LAP GRLAVISFHSLEDRIVK  F        E A+G          D  V     +  +     KI+T++PIT S EE ++N R +SAKLRV QKI
Sbjct:  146 EGEIFRILWEYGEERWSKRIAQFIVNRRTEQPLASTTDLVDVIRAAIPAAARQEGG--HPAKRTFQALRIAVNDELGALQEALPAALDALAPSGRLAVISFHSLEDRIVKNFF-------AEQAKG-----CTCPPDMPVCGCGKKARL-----KIITRKPITGSEEELKINPRSQSAKLRVAQKI 312          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_GEOTN (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mraW PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.879e-26
Identity = 75/183 (40.98%), Postives = 104/183 (56.83%), Query Frame = -3
Query:  180 EVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 728
            E+ R+   YGEE   + +  KI   R +  + +TGELV++I++  P    R  G    A R+FQALRIAVNDEL+    +L    + LAPGGR++VI+FHSLEDRI K+TF         ++      L  + DD        R ++     KI+TK+P+ PSAEE   N R RSAKLR+ +K
Sbjct:  146 ELVRIFFRYGEEKFSKQVARKIEEVRRKRPIETTGELVEVIKAAIPAPARRSGG--HPAKRIFQALRIAVNDELEAFREALEQAIELLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD-------YRPVL-----KIITKKPVVPSAEELERNNRARSAKLRIAEK 309          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_OPITP (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=mraW PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25
Identity = 74/181 (40.88%), Postives = 96/181 (53.04%), Query Frame = -3
Query:  177 RVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 719
            R +R++GEE +WR +   I  AR  G L  T  L +LI +  P    R    I  ATR FQ +RIAVNDE+  +E +L A F  LAPGG L VISFHSLEDR  KQ F  +       A+   +DLR    D                   LT+RP+TP+ +E   N R RSAKLR ++++
Sbjct:  145 RAIRDFGEEQHWRRIVRAIRDARGTGALARTASLAELIAAAIPAC-DRHAAKIHPATRAFQGVRIAVNDEIGAIERALPAAFAKLAPGGVLCVISFHSLEDRPAKQFFRRMCGQPESAADATPQDLRVKLADP------------------LTRRPVTPADDELAANPRSRSAKLRALRRL 306          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_GEOKA (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Geobacillus kaustophilus GN=mraW PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.310e-25
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = -3
Query:  177 EVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 728
            E+ R+   YGEE   + +  KI   R    + +TGELVD+I++  P    R  G    A R+FQALRIAVNDEL+    +L    + LAPGGR++VI+FHSLEDRI K+TF         ++      L  + DD        R ++     KI+TK+PI PS EE   N R RSAKLR+ +K+
Sbjct:  146 ELVRIFFRYGEERFSKQVARKIEEVRRTRPIKTTGELVDVIKAAIPAPARRSGG--HPAKRIFQALRIAVNDELEAFREALEQAIELLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD-------YRPVL-----KIITKKPIVPSEEELERNHRARSAKLRIAEKL 310          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_BACHD (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus halodurans GN=mraW PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 75/185 (40.54%), Postives = 104/185 (56.22%), Query Frame = -3
Query:  180 EVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 728
            E+ +++  YGEE   + +  KI ++R +  + +TGELVD+I+   P    R  G    A R FQA+RIAVNDEL   E +L A  D  AP GR+ VI+FHSLEDRI K+ F       RE ++G +    L  I ++                 K++TK+PI P+AEE  LN R RSAKLR+ +K
Sbjct:  146 ELMKIISRYGEERFAKQIARKIEQSREKKPIRTTGELVDIIKEAIPAPARRTGG--HPAKRTFQAIRIAVNDELGAFEEALEAAIDLTAPKGRICVITFHSLEDRICKEMF-------REASKGPDVPPGLPVIPEEYKATL------------KLITKKPIVPTAEEIELNNRARSAKLRIAEK 309          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_PROA2 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=mraW PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25
Identity = 73/186 (39.25%), Postives = 106/186 (56.99%), Query Frame = -3
Query:  180 DAEVGRVLREYGEESNWRCLQNKI-VRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 734
            ++E+  ++  YGEE   R +   I  R R +G    T EL  +++SV  G        IK+ +RVFQALRIAVNDEL  LES+L     CLAP GR+ V+S+HSLEDR+VK+ F       R+ +E          DD       +R+ ++    K++T++ +  S +E R+N R RSA+LRVI+K
Sbjct:  156 ESELAGIIYRYGEEKKSRAIARAIKARVREKGDFRETAELAAVVRSVVAG----HDRQIKSLSRVFQALRIAVNDELGVLESALEDGTACLAPSGRMGVMSYHSLEDRMVKRFF-------RDKSE----------DDWGPKGVGLREPLRSAGFKLVTRKSVVASDDEVRINPRARSARLRVIEK 320          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_ROSS1 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Roseiflexus sp. (strain RS-1) GN=mraW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 73/186 (39.25%), Postives = 99/186 (53.23%), Query Frame = -3
Query:  177 DAEVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 734
            + E+  ++  YGEE   R +   IV AR R  + +T EL  ++     G RGR    I  ATR FQALRIAVN+EL +LE++L    D LAPGGR+A+I+FHSLEDRIVK T                                +R   Q     I+T++P+  S EE+R N R RSA+LRV +++
Sbjct:  163 EQELADLIFRYGEERGSRRIARAIVEARQRKPVTTTDELAAIVTRALGGQRGR----IHPATRTFQALRIAVNNELASLEAALPQIIDLLAPGGRMAIIAFHSLEDRIVKHT--------------------------------LRAEAQAGRLHIITRKPVEASIEEQRANPRSRSARLRVAERV 312          
BLAST of CN187859 vs. ExPASy Swiss-Prot
Match: MRAW_PELPD (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Pelobacter propionicus (strain DSM 2379) GN=mraW PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.500e-25
Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = -3
Query:  177 EVGRVLREYGEESNWRCLQNKIVRARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLYACFDCLAPGGRLAVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEDLRNIRDDNNVNETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 728
            E+ R++REYGEE   + + + IVRAR    + +T  LVD+I+   P  +   +  +  ATR FQALRIAVN EL++LE  L +  D L PGGR  VISFHSLEDRIVK  F       RE A G     RN+       +  +R         +LT RP+T + EE R N R RSAKLR ++K+
Sbjct:  149 ELERIIREYGEERWAKRIASFIVRARSEAPIENTLRLVDIIKGAIPKAKWEER--LHPATRTFQALRIAVNHELESLERGLKSAIDRLKPGGRGVVISFHSLEDRIVKHVF-------REYAAGCTCP-RNLPVCVCGRQPRVR---------VLTGRPVTATEEELRDNPRSRSAKLRAVEKL 313          
The following BLAST results are available for this feature:
BLAST of CN187859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRAW_HELMI2.387e-2745.70S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PAESJ5.879e-2638.83S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_HELMO5.879e-2645.16S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_GEOTN5.879e-2640.98S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_OPITP1.310e-2540.88S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_GEOKA1.310e-2541.30S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACHD2.918e-2540.54S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PROA24.977e-2539.25S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_ROSS16.500e-2539.25S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PELPD6.500e-2543.48S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005B21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187859 ID=CN187859; Name=CN187859; organism=Citrus sinensis; type=EST; length=736bp
AGTCTTGATAAATTTTCCTATACATACTCATGAATCCTACATTAGACATG
GCAATAAAAATGATGGGATGGTGGAATACCAAAGCCCGAGGCATAGTTTG
ATGATACAGAATATGTTGGTTGGTGGTTTTTCCTTGATTTGTCAGGCTCA
GGCAATTTCTGTTCAACTCCTCTTCAAATCTTCTGAATCACCCTGAGCTT
AGCACTCCTACAACGGCAATTAAGTCTTTCCTCCTCTGCAGATGGTGTTA
TCGGTCTCTTGGTGAGAATTTTTCCATTCCAACCTTGTATTATCTGTCTA
ATCCATGTTTCATTTACATTGTTGTCATCTCTGATATTTCTCAAATCTTC
TTCATTCCCCTCTGCATCTTCTCTGTTATGGTCAATGATGCTGAGAAACG
TTTGTTTCACAATTCTATCCTCCAAACTGTGGAAAGAGATAACGGCAAGC
CTACCCCCAGGAGCAAGACAGTCAAAACAAGCATAGAGAGAACTCTCCAG
AGTTTTGAGTTCATCATTCACTGCTATTCTCAGAGCTTGAAACACGCGCG
TAGCTGTCTTTATCCAACCTTGCCTACGTCCTCTCATCCCAGGAGTCACA
CTCTGAATTAGATCTACAAGTTCACCAGTAGAATGCAATCCACCACGAAG
GCGAGCCCGAACTATTTTATTTTGAAGGCAACGCCAGTTGCTTTCTTCTC
CATACTCCCGCAAGACTCGCCCCACTTCAGCATCTG
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