CN187842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: PGDH_MOUSE (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Mus musculus GN=Hpgd PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.836e-17 Identity = 59/180 (32.78%), Postives = 91/180 (50.56%), Query Frame = -2 Query: 364 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 846 LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IINM S AGL P P+Y ASK G++ FTRS G+R+NV+CP FV+T + ++ Q+ +M G + T+ G LI D++ G+ + IT +G+ + Sbjct: 85 LDILVNNAGVNNE-----------KNWEQTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVDTPILESIEKEENMGQYIEYKDQIKAMMKFYGVLHPSTIANGLINLIEDDALNGAIMKITASKGIHF 253
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.077e-16 Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = -2 Query: 364 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLTPYK---SKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 846 LDI +N+AG++N ++W TL +NLV+VI T + M Q + GVIINM S AGL P P+Y ASK G++ FTRS + + G+R+N +CP FV T + ++ + D+M G + + + G LI D+ G+ + IT G+ + Sbjct: 85 LDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICPGFVNTSILQSIEKEENMGPYIEYTGHIKDMMKCYGILDPEMIANGLITLIEDDDLNGAIMKITTSNGIHF 253
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: PGDH_BOVIN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Bos taurus GN=HPGD PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16 Identity = 58/180 (32.22%), Postives = 88/180 (48.89%), Query Frame = -2 Query: 364 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELALKAGSQ-----LIDLMG---------GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 846 LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+ INM S AGL P P+Y ASK G+V FTRS + G+R+N +CP FV+T + + I+ MG G + + G LI D++ G+ + IT +G+ + Sbjct: 85 LDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGININMSSLAGLMPVAQQPVYCASKHGIVGFTRSAAMAANLMNSGVRLNAICPGFVDTPILKSIEKEENMGKYIEYMGPIKDMMKYYGILDPSMIANGLITLIEDDALNGAIMKITTSKGIHF 253
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: PGDH_RAT (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16 Identity = 57/180 (31.67%), Postives = 90/180 (50.00%), Query Frame = -2 Query: 364 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 846 LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IIN+ S AGL P P+Y ASK G++ FTRS G+R+NV+CP FV+T + ++ Q+ +M G + + G LI D++ G+ + IT +G+ + Sbjct: 85 LDILVNNAGVNNE-----------KNWEQTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINISSIAGLMPVAQQPVYCASKHGIIGFTRSAAMAANLMKSGVRLNVICPGFVKTPILESIEKEENMGQYIEYTDQIKAMMKFYGILDPSAIANGLINLIEDDALNGAIMKITASKGIHF 253
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: PGDH_HUMAN (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Homo sapiens GN=HPGD PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16 Identity = 60/191 (31.41%), Postives = 95/191 (49.74%), Query Frame = -2 Query: 337 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY--WPTSEEEAK 846 LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IINM S AGL P P+Y ASK G+V FTRS + G+R+N +CP FV T + ++ + D++ G + + G LI D++ G+ + IT +G+ + + T+ +AK Sbjct: 85 LDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDYDTTPFQAK 264
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: PGDH_MACFA (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Macaca fascicularis GN=HPGD PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.347e-16 Identity = 57/180 (31.67%), Postives = 89/180 (49.44%), Query Frame = -2 Query: 364 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIM--QAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRS---LTPYKSKGIRINVLCPEFVETELA------------LKAGSQLIDLMG--GFVPMDTVVKGAFELITDESKAGSCLWITNRRGMEY 846 LDI +N+AG++N ++W TL +NLV+VI T + M Q + G+IINM S AGL P P+Y ASK G+V FTRS + G+R+N +CP FV T + ++ + D++ G + + G LI D++ G+ + IT +G+ + Sbjct: 85 LDILVNNAGVNNE-----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHF 253
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = -2 Query: 499 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELALKA 846 LD+ IN+AGI P HE + W L VNL + ++ A+ M AA K G IIN S GL + P Y+ASKGGV+ T+S+ Y IR+N +CP ++T L K+ Sbjct: 81 LDVLINNAGIEIVAPIHEMELS---DWNKVLQVNLTGMFLMSKHALKHMLAAGK-GNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKS 193
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11 Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = -2 Query: 499 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSL-TPYKSKGIRINVLCPEFVETELALKA 846 LD+ IN+AGI P HE + +W L+VNL + ++ A+ M + K G IIN S G+ + P Y+ASKGGV+ TRS+ Y IR+N +CP ++T L K+ Sbjct: 81 LDVLINNAGIEIVAPIHEMELS---NWNKVLNVNLTGMFLMSKHALKYMLKSGK-GNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKS 193
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: FABG_ARATH (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g24360 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11 Identity = 43/134 (32.09%), Postives = 71/134 (52.99%), Query Frame = -2 Query: 457 LDICINSAGISNP---IPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETELALKAGSQLIDLMGGFVPM 846 +D+ +N+AGI+ I + Q W + +NL V CTQ A+ IM KK G IIN+ S GL Y+A+KGGV+ F+++ S+ I +NV+CP F+ +++ + G + + G +P+ Sbjct: 155 IDVVVNNAGITRDTLLIRMKQSQ------WDEVIALNLTGVFLCTQAAVKIMMK-KKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVNVVCPGFIASDMTAELGEDMEKKILGTIPL 281
BLAST of CN187842 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = -2 Query: 511 LDICINSAGISNPIPFHEDQTDGTRSWRFTLDVNLVAVIDCTQKAIGIMQAAKKPGVIINMGSSAGLYPFYTDPIYSASKGGVVLFTRSLT-PYKSKGIRINVLCPEFVETEL 846 LD+ IN+AG+ NP+P HE D +W +D NL +++AI G +INM S + P+ Y+ASKGG+ L T +L Y KGIR+N + P + T + Sbjct: 86 LDVMINNAGVENPVPSHELSLD---NWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPI 195 The following BLAST results are available for this feature:
BLAST of CN187842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187842 ID=CN187842; Name=CN187842; organism=Citrus sinensis; type=EST; length=847bpback to top |