CN187828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.456e-98 Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 1 Query: 4 LLPMIPSLFSRFHVVTKLALKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKAN 708 L+ IPSLFSRF VTKL+LKCDRRSVS+GD+AL+ IS +CRNL RLKLRACRELTD GM+ FA+NCK LK SCGSC FGAKG+ AVLD+CS LEELS+KRLRG TD A E IGPGVAASSLK++CLKELYNGQCFGP+I+GAKNL++LKLFRCSGDWD LLQ ++ + +VEIHLER+QV+DV L+AIS C LE +HLVKTPECTN GLAA+AE+CK LRKLHIDGWKAN Sbjct: 89 LITSIPSLFSRFDSVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTD-IAPEMIGPGVAASSLKSICLKELYNGQCFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKAN 322
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FBL8_ARATH (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8 PE=2 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 3.009e-88 Identity = 155/235 (65.96%), Postives = 192/235 (81.70%), Query Frame = 1 Query: 4 LLPMIPSLFSRFHVVTKLALKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKAN 708 L+ +IPSLF+RF VTKL L+ DRRS+ + D+A ++IS +CRNLTRLKLR C E++D G+ F +NC+ LKK+S GSC FG KGMNA+L+ C LEELSVKRLRGI GA AE IGPG AA SLK +CLKEL+NGQCF PL+ GAK LR LK+FRCSGDWD++ + V D+V ++VEIHLERIQ++D+GL A+S C +E++HLVKTP+CTN+GLA VAERCKLLRKLHIDGWK N Sbjct: 123 LISVIPSLFTRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGI--GAGAELIGPGGAAGSLKVICLKELHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLERIQMSDLGLTALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTN 355
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: SKIP2_ARATH (F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.889e-82 Identity = 144/231 (62.34%), Postives = 185/231 (80.09%), Query Frame = 1 Query: 16 IPSLFSRFHVVTKLALKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWKAN 708 + S+F+RF VTKLAL+CDR+SVS+ D+AL +IS +C NLTR+KLR CRE+TD GM FAKNCK LKKLS GSC FGAKG+NA+L++C LEELSVKRLRGI + A + ++SSL+++CLKEL NGQ F PL+ + L+TLK+ RC GDWDK+LQ++ + +SL EIHLER+QV+D+GL+AIS C ++E +H+VKTPEC+N GL VAERCKLLRKLHIDGW+ N Sbjct: 96 LTSMFNRFDSVTKLALRCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEIHLERLQVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTN 326
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FBL16_ARATH (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.023e-76 Identity = 137/233 (58.80%), Postives = 184/233 (78.97%), Query Frame = 1 Query: 4 LLPMIPSLFSRFHVVTKLALKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQVTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWK 702 +LP +P +F+RF VTKLAL+CDRRS S+ D+AL ++S +C NL R+KLR CRE+TD GM FA+NCK L+KLSCGSCTFGAKG+NA+L++C LEELS+KR+RG+ + AEPI ++A SL++V LKEL NGQ FG L + + L+ +K+ RC G+WD++ ++ + +SL EI LER+QVTD+GL IS C +LE +H+VKTP+C+NLGLA+V ERCKLLRKLHIDGW+ Sbjct: 90 ILPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHE--LAEPIKLSLSA-SLRSVFLKELVNGQVFGSL-VATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLTEIRLERLQVTDIGLFGISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWR 318
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FBL3_ARATH (F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana GN=FBL3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 61/208 (29.33%), Postives = 99/208 (47.60%), Query Frame = 1 Query: 76 RSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCTFGAKGMNAVL-DNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKT-VCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERIQ-VTDVGLAAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHI 690 + VSV D+ L + K ++L +L + CR+L+ ++ A +C L L SC+ ++ ++ C LEEL + D + I ++ SSLK +CL G + + +G NLR L L+R G D + + L I++ Q +TD L ++S C L+ P T+ GLAA+A RCK L K+ + Sbjct: 338 KCVSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNE--IDDEGLKSISSCLSLSSLKLGICLNITDKGLSY--IGMGCSNLRELDLYRSVGITDVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDL 541
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FXL20_MOUSE (F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 63/213 (29.58%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 73 RRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCT-FGAKGMNAVLDNCSTLEELSVKRLRGIT-DGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGA--KNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERI-QVTDVGLAAI-SNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHID 693 R + VGD+AL +Q CRN+ L L C + TDA + +K C L+ L SCT + A+ + C LE+L++ +T DG A G G LK + LK + IGA L TL L C D+ L + L + +TD L A+ NC L I+ + + + T++G +A C L K+ ++ Sbjct: 99 RGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCG----GLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLE 307
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FXL20_HUMAN (F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 63/213 (29.58%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 73 RRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCT-FGAKGMNAVLDNCSTLEELSVKRLRGIT-DGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGA--KNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERI-QVTDVGLAAI-SNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHID 693 R + VGD+AL +Q CRN+ L L C + TDA + +K C L+ L SCT + A+ + C LE+L++ +T DG A G G LK + LK + IGA L TL L C D+ L + L + +TD L A+ NC L I+ + + + T++G +A C L K+ ++ Sbjct: 99 RGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCG----GLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLE 307
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FXL20_BOVIN (F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 63/213 (29.58%), Postives = 95/213 (44.60%), Query Frame = 1 Query: 73 RRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSCT-FGAKGMNAVLDNCSTLEELSVKRLRGIT-DGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGA--KNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERI-QVTDVGLAAI-SNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHID 693 R + VGD+AL +Q CRN+ L L C + TDA + +K C L+ L SCT + A+ + C LE+L++ +T DG A G G LK + LK + IGA L TL L C D+ L + L + +TD L A+ NC L I+ + + + T++G +A C L K+ ++ Sbjct: 99 RGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCG----GLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLE 307
BLAST of CN187828 vs. ExPASy Swiss-Prot
Match: FBL4_ARATH (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 62/217 (28.57%), Postives = 94/217 (43.32%), Query Frame = 1 Query: 61 LKCDRRSVSVGDDALILISQKCRNLTRLKLRACRELTDAGMSVFAKNCKGLKKLSCGSC-TFGAKGMNAVLDNCSTLEELSVKRLRGITDGAAAEPIGPGVAASSLKTVCLKELYNGQCFGPLIIGAKNLRTLKLFRCSGDWDKLLQLVTDRVTSLVEIHLERI-QVTDVGL-AAISNCLDLEIMHLVKTPECTNLGLAAVAERCKLLRKLHIDGWK 702 L C R +G+ AL I + C++L L L C + D M AK C+ LKKL C G KG+ ++ +C +L ELS+ R A IG G + L ++ + + G L L + D L + + L ++ L +TD GL + C LE H+V P T+ G+A V C ++K+ I+ WK Sbjct: 380 LYCQR----IGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSL-RFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAG-ITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLIEKWK 590 The following BLAST results are available for this feature:
BLAST of CN187828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187828 ID=CN187828; Name=CN187828; organism=Citrus sinensis; type=EST; length=709bpback to top |