CX675526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.975e-40 Identity = 74/95 (77.89%), Postives = 82/95 (86.32%), Query Frame = 2 Query: 89 SANNGGGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 S+ GGGPCGACKFLRRKCV GC+FAPYFD++QG HFAAVHKVFGASN SKLL +P HKR DAVVS+C+EA AR RDPIYGCV HIV+LQQQV Sbjct: 10 SSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQV 104
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.075e-40 Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 2 Query: 83 MMSAN-NGGG-----PCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 MM+ N NGGG PCGACKFLRRKCVKGCVFAPYFDA+QGT FAAVHKVFGASNASK+L R+P HKRLDAVV+LCYEAMAR RDP+YG VGH+ +LQ QV Sbjct: 1 MMTGNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQV 103
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39 Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 2 Query: 89 SANNGGGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 S GGGPCGACKFLRRKCV GC+FAPYFD++QG+ +FAAVHKVFGASN SKLL IP H+R DAVV++CYEA AR RDPIYGCV HI ALQQQV Sbjct: 30 SGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQV 124
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD31_ARATH (LOB domain-containing protein 31 OS=Arabidopsis thaliana GN=LBD31 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 6.860e-37 Identity = 73/98 (74.49%), Postives = 80/98 (81.63%), Query Frame = 2 Query: 80 MMMSANNGGGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 M S GGPCGACKFLRRKCV CVFAPYFD+ +GT+HF AVHKVFGASNASKLL IP +RLDAVV+L YEA+AR RDP+YGCVGHI ALQ QV Sbjct: 1 MSGSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIPASRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQV 98
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.385e-35 Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 2 Query: 80 MMMSANNGGGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 M S+++ G PCGACKFLRRKC KGCVFAPYF +QG +HFAA+HKVFGASNASKLLS +P R +A +++ YEA AR +DPIYGCV HI ALQQQV Sbjct: 1 MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQV 98
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.009e-33 Identity = 65/103 (63.11%), Postives = 76/103 (73.79%), Query Frame = 2 Query: 83 MMSANNG-----GGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQVS 376 M S+ NG G PCGACKFLRRKC C+FAPYF ++QG FAA+HKVFGASN SKLL +P H R +AVV++ YEA AR DP+YGCV HI ALQQQV+ Sbjct: 1 MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVA 103
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD17_ARATH (LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.339e-32 Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 2 Query: 104 GGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 G PCGACKFLRR+CVKGCVFAPYF +QG +HFAA+H+VFGASNASKLLS +P R +A ++ YEA AR +DPIYGCV HI +LQQQV Sbjct: 5 GSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRREAATTIYYEAQARRQDPIYGCVSHIFSLQQQV 94
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.284e-32 Identity = 67/101 (66.34%), Postives = 78/101 (77.23%), Query Frame = 2 Query: 83 MMSANNGGG---PCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQVS 376 M +A G G PCGACKFLRRKCV GC+FAP+F +DQG FAAVHKVFGASN SKLL IP ++R DAVV++ YEA AR DP+YGCV I+ALQQQV+ Sbjct: 39 MAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVA 139
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD14_ARATH (LOB domain-containing protein 14 OS=Arabidopsis thaliana GN=LBD14 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31 Identity = 60/90 (66.67%), Postives = 73/90 (81.11%), Query Frame = 2 Query: 104 GGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 G PCG CKFLRRKCV+GCVFAPYF ++G+++FAA+HKVFGASN SKL+S +P H R DAV ++ YEA +R DPIYGCV I +LQQQV Sbjct: 5 GSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQV 94
BLAST of CX675526 vs. ExPASy Swiss-Prot
Match: LBD33_ARATH (LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.031e-29 Identity = 57/90 (63.33%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 104 GGPCGACKFLRRKCVKGCVFAPYFDADQGTTHFAAVHKVFGASNASKLLSRIPPHKRLDAVVSLCYEAMARTRDPIYGCVGHIVALQQQV 373 G CGACKFLRRKC + CVF+PYF +Q ++HFAAVHKVFGASN SK L +P H+R A +++ YEA++R RDP+YGCV HI AL QQV Sbjct: 5 GSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQRNIAAITISYEALSRMRDPVYGCVAHIFALHQQV 94 The following BLAST results are available for this feature:
BLAST of CX675526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675526 ID=CX675526; Name=CX675526; organism=Citrus sinensis; type=EST; length=821bpback to top |