CX675522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVFP (Pol polyprotein OS=Friend murine leukemia virus (isolate PVC-211) GN=pol PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.287e-18 Identity = 79/256 (30.86%), Postives = 111/256 (43.36%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLL--HNTRLRLFLGKLKSRWSSPFKLLKSYP 786 W IDF P +G Y+LV VD S WVEA AK + L + IF RFG P+V+ +D G F +K+ GV K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG L + + DM LQ L L L +E + + D+ + F G V + H T+ L+ RW P+ +L + P Sbjct: 918 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKKETAKVVTKKLLEEIFPRFGMPQVLGTDNGPAFVSKVSQTVADLLGVDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRDWVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPL-----------VNFPDPDMAKVTHNPSLQ-AHLQALYLVQHEVWRPLAAAYQEQLDRPVVPHPFRVGDTVWVRRHQTK------NLEPRWKGPYTVLLTTP 1154
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVF5 (Pol polyprotein OS=Friend murine leukemia virus (isolate 57) GN=pol PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.287e-18 Identity = 79/256 (30.86%), Postives = 111/256 (43.36%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLL--HNTRLRLFLGKLKSRWSSPFKLLKSYP 786 W IDF P +G Y+LV VD S WVEA AK + L + IF RFG P+V+ +D G F +K+ GV K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG L + + DM LQ L L L +E + + D+ + F G V + H T+ L+ RW P+ +L + P Sbjct: 918 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKKETAKVVTKKLLEEIFPRFGMPQVLGTDNGPAFVSKVSQTVADLLGVDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRDWVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPL-----------VNFPDPDMAKVTHNPSLQ-AHLQALYLVQHEVWRPLAAAYQEQLDRPVVPHPFRVGDTVWVRRHQTK------NLEPRWKGPYTVLLTTP 1154
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVFF (Pol polyprotein OS=Friend murine leukemia virus (isolate FB29) GN=pol PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.599e-18 Identity = 78/256 (30.47%), Postives = 111/256 (43.36%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLL--HNTRLRLFLGKLKSRWSSPFKLLKSYP 786 W IDF P +G Y+LV +D S WVEA AK + L + IF RFG P+V+ +D G F +K+ GV K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG L + + DM LQ L L L +E + + D+ + F G V + H T+ L+ RW P+ +L + P Sbjct: 918 WEIDFTEVKPGLYGYKYLLVFIDTFSGWVEAFPTKKETAKVVTKKLLEEIFPRFGMPQVLGTDNGPAFVSKVSQTVADLLGVDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRDWVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPL-----------VNFPDPDMAKVTHNPSLQ-AHLQALYLVQHEVWRPLAAAYQEQLDRPVVPHPFRVGDTVWVRRHQTK------NLEPRWKGPYTVLLTTP 1154
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVMO (Gag-Pol polyprotein OS=Moloney murine leukemia virus GN=gag-pol PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.779e-17 Identity = 75/256 (29.30%), Postives = 111/256 (43.36%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLL--HNTRLRLFLGKLKSRWSSPFKLLKSYP 786 W IDF P +G Y+LV +D S W+EA AK + L + IF RFG P+V+ +D G F +K+ G+ K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG L + + DM LQ L L L +E + + D+ + + G V + H T+ L+ RW P+ +L + P Sbjct: 1452 WEIDFTEIKPGLYGYKYLLVFIDTFSGWIEAFPTKKETAKVVTKKLLEEIFPRFGMPQVLGTDNGPAFVSKVSQTVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRDWVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPL-----------VNFPDPDMTRVTNSPSLQ-AHLQALYLVQHEVWRPLAAAYQEQLDRPVVPHPYRVGDTVWVRRHQTK------NLEPRWKGPYTVLLTTP 1688
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_XMRV3 (Gag-Pol polyprotein OS=Xenotropic MuLV-related virus (isolate VP35) GN=gag-pol PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17 Identity = 55/150 (36.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W +DF P +G Y+LV VD S WVEA AK + L ++IF RFG P+V+ SD G F +++ + G+ K+ Y S+GQ + NR IK+ L K+ + RDW L L +L+ R P G++PY I+YG Sbjct: 1450 WEVDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKRETAKVVTKKLLEDIFPRFGMPQVLGSDNGPAFASQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLASGTRDWVLLLPLALYRARNT-PGPHGLTPYEILYG 1598
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVRK (Pol polyprotein (Fragment) OS=Radiation murine leukemia virus (strain Kaplan) GN=pol PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17 Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W IDF P +G Y+LV VD S WVEA AK + L + IF RFG P+V+ +D G F +++ + G+ K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG Sbjct: 298 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKHETAKIVTKKLLEEIFPRFGMPQVLGTDNGPAFVSQVSQSVAKLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGTRDWVLLLPLALYRARNT-PGPHGLTPYEILYG 446
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVRD (Pol polyprotein OS=Radiation murine leukemia virus GN=pol PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17 Identity = 56/150 (37.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W IDF P +G Y+LV VD S WVEA AK + L + IF RFG P+V+ +D G F +++ + G+ K+ Y S+GQ + NR IK+ L K+ T RDW L L +L+ R P G++PY I+YG Sbjct: 913 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKHETAKIVTKKLLEEIFPRFGMPQVLGTDNGPAFVSQVSQSVAKLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGTRDWVLLLPLALYRARNT-PGPHGLTPYEILYG 1061
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_MLVAV (Pol polyprotein OS=AKV murine leukemia virus GN=pol PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.629e-17 Identity = 79/256 (30.86%), Postives = 112/256 (43.75%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKV-VNPTRRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYGKACHLPLELEHKAHWALKKLNWDMHAAAEQRKLQLCELDELRLFSYESEKIYKERTKHWHDKHIQHKKFIPGQLVLL--HNTRLRLFLGKLKSRWSSPFKLLKSYP 786 W IDF P +G Y+LV VD S WVEA A+ + L + IF RFG P+V+ SD G F +++ + G+ K+ Y S+GQ + NR IK+ L K+ + RDW L L +L+ R P G++PY I+YG PL H DM LQ L L+ E K E + D+ + F G V + H T+ L+ RW P+ +L + P Sbjct: 913 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKRETARVVSKKLLEEIFPRFGMPQVLGSDNGPAFTSQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLAAGTRDWVLLLPLALYRARNT-PGPHGLTPYEILYG--APPPLVNFHDP---------DMSELTNSPSLQ-AHLQALQTVQREIWKPLAEAYRDQLDQPVIPHPFRIGDSVWVRRHQTK------NLEPRWKGPYTVLLTTP 1149
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_XMRV6 (Gag-Pol polyprotein OS=Xenotropic MuLV-related virus (isolate VP62) GN=gag-pol PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.190e-17 Identity = 55/150 (36.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W +DF P +G Y+LV VD S WVEA AK + L ++IF RFG P+V+ SD G F +++ + G+ K+ Y S+GQ + NR IK+ L K+ + RDW L L +L+ R P G++PY I+YG Sbjct: 1450 WEVDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKRETAKVVSKKLLEDIFPRFGMPQVLGSDNGPAFASQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLASGTRDWVLLLPLALYRARNT-PGPHGLTPYEILYG 1598
BLAST of CX675522 vs. ExPASy Swiss-Prot
Match: POL_XMRV4 (Gag-Pol polyprotein OS=Xenotropic MuLV-related virus (isolate VP42) GN=gag-pol PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.190e-17 Identity = 55/150 (36.67%), Postives = 79/150 (52.67%), Query Frame = 1 Query: 28 WGIDFMGPFPPFFGNLYILVAVDYVSKWVEATALPTNDAKTMVTFLQKNIFSRFGTPRVIISDEGAYFCNKIFAATMMKYGVRHKIATTYHL*SNGQAKVSNREIKKILEKVVNPT-RRDWSLHLHDSLWAYRTAYKTPLGMSPYRIVYG 474 W +DF P +G Y+LV VD S WVEA AK + L ++IF RFG P+V+ SD G F +++ + G+ K+ Y S+GQ + NR IK+ L K+ + RDW L L +L+ R P G++PY I+YG Sbjct: 1450 WEVDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKRETAKVVSKKLLEDIFPRFGMPQVLGSDNGPAFASQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLASGTRDWVLLLPLALYRARNT-PGPHGLTPYEILYG 1598 The following BLAST results are available for this feature:
BLAST of CX675522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675522 ID=CX675522; Name=CX675522; organism=Citrus sinensis; type=EST; length=831bpback to top |