CN187776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.119e-47 Identity = 92/151 (60.93%), Postives = 119/151 (78.81%), Query Frame = 1 Query: 235 VGNLVSRTGRHLQRYQK-GRRQVVGCIPYRYKCVKQSLD-INEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 V +LVSRTGR LQRY G RQVVGC+PYRYK KQ ++ + + ++VL++S+QKGKGMLFPKGGWE DES++EAALRETIEEAGVTG +E E LG+W +KS+ H+ + GYMF LLV + WPE +R R+W+S+ EAR+VCQ+WWM+ Sbjct: 40 VVSLVSRTGRDLQRYDHAGYRQVVGCVPYRYK--KQEVNGVETQVIQVLLVSAQKGKGMLFPKGGWETDESMEEAALRETIEEAGVTGELE-EKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNWWMR 187
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.504e-46 Identity = 89/146 (60.96%), Postives = 113/146 (77.40%), Query Frame = 1 Query: 244 LVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 L SRTGR QRY KGRRQVVGC+PYR+K I++E +EVLVISSQKG ++FPKGGWE+DES++EAA RE +EEAGV G VE +L G+W+F S++ T Y+G MFP+LV +QL WPE++VR R WM+V EAR+ C+ WWMK Sbjct: 9 LASRTGRQFQRYNKGRRQVVGCVPYRFKLSNDG-KISDE-VEVLVISSQKGHALMFPKGGWELDESVEEAASRECLEEAGVLGNVEHQL-GKWDFLSKSRGTYYEGLMFPMLVTEQLELWPEQHVRQRIWMNVTEAREACRDWWMK 151
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.003e-45 Identity = 89/146 (60.96%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 244 LVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 LVSRTGR QRY KGRRQVVGCIPYR K + I++E EVLVISSQKG ++FPKGGWE+DES++EAA RE++EEAGV G VE +L G+W+F S++ T Y+G+MFP+LV+++L WPE+++R R WM V EAR C+ WWMK Sbjct: 4 LVSRTGRQSQRYNKGRRQVVGCIPYRLK-ISSDGTISDE-FEVLVISSQKGHALMFPKGGWELDESVEEAASRESLEEAGVVGNVERQL-GKWDFLSKSKGTFYEGFMFPMLVKEELELWPEQHLRQRIWMKVDEARDACRDWWMK 146
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.919e-45 Identity = 96/166 (57.83%), Postives = 119/166 (71.69%), Query Frame = 1 Query: 190 VAQETIVSLVTPENVVGNLVSRTGRHLQRYQK-GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 + + IV + TP V +LVSRTGR LQRY G RQVVGC+PYRYK ++EVL+IS+QK GKGML PKGGWEIDESI+EAALRETIEEAGVTG +E E LG+W +KS+ H + G+MFPLLV Q WPE R RKW+S++EA ++CQ+ WM+ Sbjct: 26 IPSKKIVPVPTPSEKVVSLVSRTGRDLQRYNTAGYRQVVGCVPYRYK------KHGGGEIEVLLISAQKKGKGMLLPKGGWEIDESIEEAALRETIEEAGVTGQLE-ESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMR 184
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.413e-36 Identity = 76/156 (48.72%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 241 NLVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEED---LEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDY------QGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 +LV+RTGR QRY+ G R V GCIP+RY V D N E ++VL+ISS G G+LFPKGGWE DE+++EAA RE +EEAGV GI+ + LG + FKS++H ++ + M+ L V+++LA WPE R+RKW+++ EA + C+H WMK Sbjct: 3 DLVARTGRLQQRYEDGSRLVAGCIPFRY--VNSDKDGNSESGKVIQVLMISSSSGPGLLFPKGGWENDETVREAAAREAVEEAGVRGIL-MDFLGNYEFKSKSHQDEFSPEGLCKAAMYALYVKEELATWPEHETRTRKWLTIEEAVESCRHPWMK 155
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.092e-31 Identity = 72/161 (44.72%), Postives = 105/161 (65.22%), Query Frame = 1 Query: 235 VGNLVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQ----SLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTD--------YQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 + NL +RTGR QRY R V GCIPYR ++ S+D E L+VL+ISS ++FPKGGWE DE++ EAA RE +EEAGV GI+ + LG W F+S++ + + +GYMF L V+++LA WPE++ R R+W++V EA ++C++ WM+ Sbjct: 1 MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDF-ENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQ 160
BLAST of CN187776 vs. ExPASy Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.981e-31 Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 244 LVSRTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEED--------LEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTD------YQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMK 681 L SRTGR QRY R V GCIPYR D EED LEVL++SS ++FPKGGWE DE++ EAA RE IEEAGV GI+ LG W F+S++ + +GYMF L V ++L +WPE+ R R+W++V EA ++C++ WM+ Sbjct: 4 LSSRTGRDRQRYDNNFRLVSGCIPYRL----MKADETEEDSGVDFVNKLEVLMVSSPNRHDLVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCKGYMFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQ 159 The following BLAST results are available for this feature:
BLAST of CN187776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN187776 ID=CN187776; Name=CN187776; organism=Citrus sinensis; type=EST; length=683bpback to top |