CX675514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.395e-57 Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDF+P+EEEEVRRENQWAFE Sbjct: 111 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171 HSP 2 Score: 119.783 bits (299), Expect = 2.395e-57 Identity = 59/98 (60.20%), Postives = 70/98 (71.43%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKD-------------DKSTEDDLKTWDADFVKVDQNTL 257 SDGE FE++E VALESQTIKHM+EDDC D IPLPNVTS ILSKVIEYCK+HVEA + S+++DLKTWD++F+KVDQ TL Sbjct: 12 SDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTL 109
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.436e-56 Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDK---KDDKSTEDDLKTWDADFVKVDQNTL 257 SDGE+FEVEE VALESQTI HMVEDDC D +PLPNVTS IL+KVIEYCK+HVEA + + +++DDLK WDADF+K+DQ TL Sbjct: 11 SDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATL 98 HSP 2 Score: 118.242 bits (295), Expect = 4.436e-56 Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 +LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNIKNDF+P+EEEEVRRENQWAFE Sbjct: 100 ELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.145e-50 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTE-DDLKTWDADFVKVDQNTL 257 SDGE+FE+EE VA++SQTIKHM+EDDCAD IPLPNVT IL+KVIEYCKKHVEA + GDK S E D+LK WD++FVKVDQ TL Sbjct: 13 SDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTL 101 HSP 2 Score: 99.7525 bits (247), Expect = 1.145e-50 Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 DLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND++P+EE EVR EN+WAFE Sbjct: 103 DLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 9.544e-50 Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGS---GDKKDDKSTED-DLKTWDADFVKVDQNTL 257 SDGE+FEVEE VA+ESQTIKHM+EDDC D IPLPNVT IL+KVIEYCKKHVEA + GDK STE+ +LKTWD DFVKVD TL Sbjct: 13 SDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVDHPTL 101 HSP 2 Score: 95.9005 bits (237), Expect = 9.544e-50 Identity = 42/61 (68.85%), Postives = 53/61 (86.89%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 DL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND++P+EE EVR EN+WAFE Sbjct: 103 DLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.731e-45 Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 +LILAANYLNIK LLDLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE Sbjct: 92 ELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152 HSP 2 Score: 90.8929 bits (224), Expect = 1.731e-45 Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257 SDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKKH + + +E+DL WD F+ ++Q+T+ Sbjct: 11 SDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKH-----HVDEANPISEEDLNNWDEKFMDLEQSTI 90
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.479e-45 Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 +LILAANYLNIK L DLTCQTVADMIKGKTPEEIR TFNI+NDF+P+EEE VR+ENQWAFE Sbjct: 92 ELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152 HSP 2 Score: 90.1225 bits (222), Expect = 8.479e-45 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKK-HVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTL 257 SDG++FEVEE VA++SQTI HMVEDDC IPL NV S IL KVIEYCKK HV+ + + +E+DL WD F+ ++Q+T+ Sbjct: 11 SDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVD------EANPISEEDLNKWDEKFMDLEQSTI 90
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.453e-43 Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 D++LAANYLNIK LLDL CQTVADMI GK P+EIR I+NDF+P+EEEE+R+ENQWAFE Sbjct: 94 DVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154 HSP 2 Score: 98.2117 bits (243), Expect = 3.453e-43 Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLL 260 SDGE+F+VEE VA++SQTI HM+EDDC +P+ NVT ILSKVIEYCKKHV + S + ++D+LK WDA+F+K ++Q++ L Sbjct: 10 SDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDS----PTEESKDELKKWDAEFMKALEQSSTL 92
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.439e-40 Identity = 44/58 (75.86%), Postives = 56/58 (96.55%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 433 +LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE++R+EN+W Sbjct: 98 ELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155 HSP 2 Score: 85.5001 bits (210), Expect = 7.439e-40 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVEAGS--GDKKDDKSTEDDLKTWDADFVKVDQNTL 257 SD + FE+E+ +A S TIK+M+ED +D+ IPLPNVTSTIL KV++YC+ H + S GD K D+ DD+ +D DF KVDQ TL Sbjct: 9 SDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTL 96
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.692e-40 Identity = 44/58 (75.86%), Postives = 56/58 (96.55%), Query Frame = 2 Query: 260 DLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 433 +LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE++R+EN+W Sbjct: 98 ELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155 HSP 2 Score: 85.1149 bits (209), Expect = 9.692e-40 Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVED-DCADTVIPLPNVTSTILSKVIEYCKKHVEAGS--GDKKDDKSTEDDLKTWDADFVKVDQNTL 257 SD + FE+E+ +A S TIK+M+ED +D IPLPNVTSTIL KV++YC+ H + S GD K D+ DD+ +D DF KVDQ TL Sbjct: 9 SDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTL 96
BLAST of CX675514 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.266e-39 Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 2 Query: 263 LILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 442 L+LAANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDF+P+EE VR+EN WAFE Sbjct: 90 LLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149 HSP 2 Score: 87.0409 bits (214), Expect = 1.266e-39 Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 3 Query: 3 SDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTL 257 SDGE+FEVEE VA + + ++HM+EDDC T +PL NVT ILS V+EYCKKHV D++S D+ KTWD +F+ K DQ T+ Sbjct: 11 SDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHV-------VDEES--DEFKTWDEEFMKKFDQPTV 87 The following BLAST results are available for this feature:
BLAST of CX675514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675514 ID=CX675514; Name=CX675514; organism=Citrus sinensis; type=EST; length=728bpback to top |