CX675510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675510 vs. ExPASy Swiss-Prot
Match: Y5195_ARATH (UPF0717 protein At5g11950 OS=Arabidopsis thaliana GN=At5g11950 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.724e-27 Identity = 65/190 (34.21%), Postives = 100/190 (52.63%), Query Frame = -2 Query: 170 MSATPNRQFKNICVLSGFTYGKHKEFVEAAIDLGRSIAARKLHLMYGGGNRGL*KMVSEAAFIRGSQVLGIIPRXXXXXXXXXXXXXXXXXXXXGMQERITEMLNHADAFIFLPGDLATLEALITLASWAHLHIHQKLIGLLNVNNFYDGFIAFLNHAIKNFFIPANVKKLFICAHTANELLDLLQAYRP 739 M +F+ ICV G G + F +AAI+LG + RK+ L+YGGG+ GL ++S + G VLGIIP+ M ER M A+AFI LPG T+E L+ + +W+ L IH+K +GLLNV+ +Y+ +A + ++ FI + + + A TA EL++ ++ Y P Sbjct: 1 MEDNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVAD-MHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTP 189
BLAST of CX675510 vs. ExPASy Swiss-Prot
Match: Y4923_PSEAE (UPF0717 protein PA4923 OS=Pseudomonas aeruginosa GN=PA4923 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.689e-25 Identity = 69/185 (37.30%), Postives = 93/185 (50.27%), Query Frame = -2 Query: 158 KNICVLSGFTYGKHKEFVEAAIDLGRSIAARKLHLMYGGGNRGL*KMVSEAAFIRGSQVLGIIPRXXXXXXXXXXXXXXXXXXXXGMQERITEMLNHADAFIFLPGDLATLEALITLASWAHLHIHQKLIGLLNVNNFYDGFIAFLNHAIKNFFIPANVKKLFICAHTANELLDLLQAYRPEPDP 712 +++CV G + G + EAA+ LGR +A R L L+YGGG GL V++AA G +V+GIIP+ M R M ADAFI LPG L TLE L + +W L H K +GLL VN FYD + FL+H + F+ A + + + LLD L A+ P P Sbjct: 4 RSVCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGAVGLMGTVADAALAAGGEVIGIIPQSLQEAEIGHKGLTRLEVVDG-MHARKARMAELADAFIALPGGLGTLEELFEVWTWGQLGYHAKPLGLLEVNGFYDPLLTFLDHLVDERFVRAEHRGMLQRGASPEALLDALAAWTPSVAP 187
BLAST of CX675510 vs. ExPASy Swiss-Prot
Match: FAS6_RHOFA (UPF0717 protein ORF6 in fasciation locus OS=Rhodococcus fascians GN=fas6 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.083e-19 Identity = 55/176 (31.25%), Postives = 85/176 (48.30%), Query Frame = -2 Query: 218 TMSATPNRQFKNICVLSGFTYGKHKEFVEAAIDLGRSIAARKLHLMYGGGNRGL*KMVSEAAFIRGSQVLGIIPRXXXXXXXXXXXXXXXXXXXXGMQERITEMLNHADAFIFLPGDLATLEALITLASWAHLHIHQKLIGLLNVNNFYDGFIAFLNH-AIKNFFIPANVKKLFIC 742 T+SA K++ V G G+ ++ + A +GR+IA KL L+YGG GL ++ AA G V+G+IP M +R M DAFI LPG + T E + +W+HL +H K LLN N +Y ++++ H A++ F PA ++ +C Sbjct: 10 TVSAQARPTPKSVTVFCGAMPGRGTKYGQLAEGMGRAIARSKLRLVYGGARVGLMGTLANAALDSGGTVVGVIPESFTAIPEAAHHGLTELHVVHDMHQRKALMAELGDAFIALPGGVGTAEEFFEVLTWSHLGLHNKPCVLLNDNEYYRPLLSYIEHAAVEGFITPATRSRVIVC 185
BLAST of CX675510 vs. ExPASy Swiss-Prot
Match: YVDD_BACSU (UPF0717 protein yvdD OS=Bacillus subtilis GN=yvdD PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.693e-17 Identity = 53/179 (29.61%), Postives = 86/179 (48.04%), Query Frame = -2 Query: 176 KNICVLSGFTYGKHKEFVEAAIDLGRSIAARKLHLMYGGGNRGL*KMVSEAAFIRGSQVLGIIPRXXXXXXXXXXXXXXXXXXXXGMQERITEMLNHADAFIFLPGDLATLEALITLASWAHLHIHQKLIGLLNVNNFYDGFIAFLNHAIKNFFIPANVKKLFICAHTANELLDLLQAY 712 K ICV +G G ++ + A +LG +A + + L+YGG GL +++A G +G++P M ER +M AD FI +PG T E L + WA + IHQK IGL NVN +++ + + ++I+ F + KL + +EL++ +Q Y Sbjct: 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNG-MHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNY 179 The following BLAST results are available for this feature:
BLAST of CX675510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675510 ID=CX675510; Name=CX675510; organism=Citrus sinensis; type=EST; length=794bpback to top |