CK938529

Overview
NameCK938529
Unique NameCK938529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2063 contig Csv1_Contig2063:103..741. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.470e-82
Identity = 150/167 (89.82%), Postives = 159/167 (95.21%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            S IAKDVTELIG TPLVYLNR+VDGCVAR+AAKLEMMEPCSSVKDRIGYSMI+DAE KGLI PGESVLIEPTSGNTGIGLAF+AAAKGYRLII MPASMSLERR +L AFGAELVLTDPARGMKGAVQKAEEI+ KTPNSY+LQQFENPANPKIHYETTGPEIW+G+
Sbjct:    6 STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELVLTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGS 172          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.010e-81
Identity = 146/165 (88.48%), Postives = 157/165 (95.15%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IAKDVTELIGKTPLVYLN + DGCVAR+AAKLE MEPCSSVKDRIG+SMI DAE+ GLI PGESVLIEPTSGNTGIGLAF+AAAKGY+LIITMPASMSLERR +L AFGAEL+LTDPA+GMKGAVQKAEEIRDKTPNSY+LQQFENPANPK+HYETTGPEIWKGT
Sbjct:    8 IAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGT 172          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.105e-79
Identity = 142/165 (86.06%), Postives = 156/165 (94.55%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IAKDVTELIG TPLVYLN +VDGCVAR+AAKLE MEPCSSVKDRIGYSMI DAEEKGLI+PGESVLIEPTSGNTG+GLAFMAAAKGY+LIITMP+SMSLERR++L  F +ELVLTDPA+GMKGA+ KAEEI+ KTPNSY+LQQFENPANPKIHYETTGPEIWKG+
Sbjct:    8 IAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGS 172          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.364e-78
Identity = 141/167 (84.43%), Postives = 156/167 (93.41%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            S IAKDVTELIG TPLVYLN + +GCV R+AAKLEMMEPCSSVKDRIG+SMI+DAE+KGLI+PGESVLIEPTSGNTG+GLAF AAAKGY+LIITMPASMS+ERR++LLAFG ELVLTDPA+GMKGA+ KAEEI  KTPN Y+LQQFENPANPKIHYETTGPEIWKGT
Sbjct:    3 SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGT 169          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 3.040e-78
Identity = 141/167 (84.43%), Postives = 155/167 (92.81%), Query Frame = 1
Query:  139 SVIAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            S IAKDVTELIG TPLVYLN + +GCV R+AAKLEMMEPCSSVKDRIG+SMI+DAE+KGLI+PGESVLIEPTSGNTG+GLAF AAAKGY+LIITMPASMS ERR++LLAFG ELVLTDPA+GMKGA+ KAEEI  KTPN Y+LQQFENPANPKIHYETTGPEIWKGT
Sbjct:    3 SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGT 169          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 3.970e-78
Identity = 141/165 (85.45%), Postives = 153/165 (92.73%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IAKDVTELIG TPLVYLNR+ DGCV R+AAKLE MEPCSSVKDRIGYSMI DAEEKGLI PG+SVLIEPTSGNTGIGLAFMAAAKGYRL++TMPASMS+ERR++L AFGAEL+LTDP  GMKGAVQKAEE+  KT NS++LQQFENPANPKIHYETTGPEIWKGT
Sbjct:    5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGT 169          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 8.844e-78
Identity = 139/165 (84.24%), Postives = 154/165 (93.33%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA DVTELIG TPLVYLN + +GCV R+AAKLEMMEPCSSVKDRIG+SMI+DAE+KGLI+PGESVLIEPTSGNTG+GLAF AAAKGY+LIITMPASMS+ERR++LLAFG ELVLTDPA+GMKGA+ KAEEI  KTPN Y+LQQFENPANPKIHYETTGPEIWKGT
Sbjct:    7 IANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGT 171          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.155e-77
Identity = 140/165 (84.85%), Postives = 152/165 (92.12%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IAKDVTELIG TPLVYLN++ DGCV R+AAKLE MEPCSSVKDRIGYSMI DAEEKG I PG+SVLIEPTSGNTGIGLAFMAAAKGYRL++TMPASMS+ERR++L AFGAEL+LTDP  GMKGAVQKAEE+  KTPNSY+LQQFEN ANPKIHYETTGPEIWKGT
Sbjct:    9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGT 173          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 2.178e-76
Identity = 140/165 (84.85%), Postives = 150/165 (90.91%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IAKDVTELIG TPLVYLN++ DGCV R  AKLE MEPCSSVKDRIGYSMI DAEEKGLI PG SVLIEPTSGNTGIGLAFMAAAKGY+L +TMPASMS+ERR++L AFGAELVLTDP  GMKGAV+KAEEI+ KTPNSY+LQQFENPANPKIHYETTGPEIWK T
Sbjct:    8 IAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKAT 172          
BLAST of CK938529 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.716e-76
Identity = 138/165 (83.64%), Postives = 152/165 (92.12%), Query Frame = 1
Query:  145 IAKDVTELIGKTPLVYLNRIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIRPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELVLTDPARGMKGAVQKAEEIRDKTPNSYVLQQFENPANPKIHYETTGPEIWKGT 639
            IA DVT LIG TPLVYLN++VDGC A+IAAKLE+MEPCSSVKDRIGYSMI DAEEKGLI PG+SVLIEPTSGNTGIGLAFMAAAKGY+LI+TMPASMS+ERR++L AFGAELVLTDP  GMKGA+QKA+E+  K PNSY+LQQFENPANPKIHYETTGPEIWK T
Sbjct:    8 IASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKAT 172          
The following BLAST results are available for this feature:
BLAST of CK938529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_CITLA3.470e-8289.82Cysteine synthase OS=Citrullus lanatus PE=2 SV=1[more]
CYSK_SPIOL5.010e-8188.48Cysteine synthase OS=Spinacia oleracea PE=1 SV=1[more]
CYSK_SOLTU2.105e-7986.06Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK1_BRAJU1.364e-7884.43Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK1_ARATH3.040e-7884.43Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]
CYSK1_ORYSJ3.970e-7885.45Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK2_BRAJU8.844e-7884.24Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK_WHEAT1.155e-7784.85Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]
CYSK_MAIZE2.178e-7684.85Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK2_ORYSJ3.716e-7683.64Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004441_F08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938529 ID=CK938529; Name=CK938529; organism=Citrus sinensis; type=EST; length=639bp
GGGGGACAGNNNNTTTATTTGTTTTTCAATTTTCTACTGTTTTCCAGCTG
CCTTGACATTGTTTACGATTCTTCCCAGAGAAAGCTTTCACGTTCGCTTG
TAACTTGAAAAAAAGAAAAAAAAATGGTGGAGGAGAAGTCCGTGATTGCG
AAAGATGTCACTGAATTGATTGGTAAAACACCATTGGTGTATCTCAACCG
CATTGTGGATGGTTGCGTTGCTAGAATTGCTGCCAAGCTGGAGATGATGG
AACCCTGCTCTAGCGTCAAAGATAGAATTGGATACAGTATGATCGCTGAT
GCAGAGGAGAAGGGTCTCATTAGACCAGGCGAGAGTGTCCTGATTGAGCC
TACCAGCGGTAATACTGGCATAGGGTTGGCATTCATGGCAGCTGCTAAGG
GTTACAGACTTATAATTACCATGCCTGCTTCAATGAGTCTTGAAAGAAGA
ATGGTTCTCCTAGCTTTTGGAGCTGAGCTTGTGCTCACTGATCCTGCCAG
GGGCATGAAGGGAGCTGTTCAGAAGGCAGAAGAGATAAGGGACAAGACAC
CGAATTCCTATGTCCTTCAGCAGTTTGAAAACCCAGCAAACCCAAAGATC
CACTACGAGACTACCGGACCAGAGATCTGGAAAGGCACC
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