CN187744

Overview
NameCN187744
Unique NameCN187744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 3.207e-98
Identity = 183/218 (83.94%), Postives = 191/218 (87.61%), Query Frame = 1
Query:   55 MAWASFAKLNAASSQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            MA ASF K N  SS WIGQ+SF   + SSS       RVS  IRAGAY++ELVKTAK+IASPGRGILAIDESNATCGKRLASIGLDNTE NRQAYRQLLLTTPGLGDYISG+ILFEETLYQST DGK FVDCLR+ NIVPGIKVDKGL PL GSN ESWCQGLDGLASRS EYYKQGARFAKWRTVVS+PCGPSALAVKEAAWGLARYAAISQDNGLV
Sbjct:    1 MASASFVKPNTLSSPWIGQRSFAHTSASSSPPP----RVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAWGLARYAAISQDNGLV 214          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 3.442e-84
Identity = 160/204 (78.43%), Postives = 171/204 (83.82%), Query Frame = 1
Query:  109 QQSFTQRTGSSSSTRFATR----RVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            + SF  +     +TR A       VS+ +RAGAY +ELVKTAKTIASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISGAILFEETLYQST DGKK VD L E+ IVPGIKVDKGLVPL GSNNESWCQGLDGLASR   YY+QGARFAKWRTVVSIP GPS LAVKEAAWGLARYAAISQDNGLV
Sbjct:    8 KSSFLPKKSEWGATRQAAAPKPVTVSMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAAISQDNGLV 211          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.479e-83
Identity = 152/176 (86.36%), Postives = 164/176 (93.18%), Query Frame = 1
Query:  181 IRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            IRAG+Y +ELVKTAKTIASPGRGILA+DESNATCGKRLASIGL+NTE NRQA+R LL+T P LG+YISGAILFEETLYQSTTDG+K VD L E+NI+PGIKVDKGLVPL GSN+ESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKEAAWGLARYAAISQDNGLV
Sbjct:    4 IRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLV 179          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.446e-82
Identity = 160/217 (73.73%), Postives = 178/217 (82.03%), Query Frame = 1
Query:   64 ASFAKLNAASSQWIGQQSFTQRTGSS-SSTRFATRRVSVPIRAG-AYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            A+  K +   S W+  QS   R  SS S+ R      ++ +RA  AY +ELVKTAKTIASPG GI+A+DESNATCGKRLASIGL+NTE NRQAYR LL++ PGLG YISGAILFEETLYQSTTDGKK VD L E+NIVPGIKVDKGLVPL GS +ESWCQGLDGLASR+  YY+QGARFAKWRTVVSIP GPSALAVKEAAWGLARYAAISQD+GLV
Sbjct:    6 ATMLKASPVKSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLV 222          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.889e-82
Identity = 156/206 (75.73%), Postives = 175/206 (84.95%), Query Frame = 1
Query:   94 SQWIGQQSFTQRTGSSSSTRFATRRVSVPIRAGA-YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            S+W+  QS   R  SS+S     R  S+ +RA + Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SIGL+NTE NRQA+R LL++ PGLG Y+SGAILFEETLYQSTT+GKK VD L E+NIVPGIKVDKGLVPL GSNNESW QGLDGL+SR+  YY+QGARFAKWRTVVSIP GPSALAVKEAAWGLARYAAISQD+GLV
Sbjct:   16 SEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLV 221          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 303.523 bits (776), Expect = 7.178e-82
Identity = 157/218 (72.02%), Postives = 176/218 (80.73%), Query Frame = 1
Query:   55 MAWASFAKLNAASSQWIGQQSFTQRTGSSSSTRFA-TRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGL 705
            MA AS  K +         +  T R  S +  RF  +   S+ +RA +Y +ELVKTAKT+ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL++ PGLG Y+SGAILFEETLYQSTTDGKK VD L E+ IVPGIKVDKG +PLPGSN+ESWCQGLDGLA RS  YY+QGARFAKWRTVVSIP GPSALAVKEAAWGLARYAAI+QDNGL
Sbjct:    1 MASASLLKTSPVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAITQDNGL 218          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.354e-80
Identity = 148/173 (85.55%), Postives = 159/173 (91.91%), Query Frame = 1
Query:  190 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            G+Y +ELVKTAKTIASPGRGILA+DESNATCGKRL SIGL+NTE NRQA+R LL+T P LG+YISGAILFEETLYQST DG+K VD L E+NI+PGIKVDKGLVPL GSNNESWCQGLDGLASRS  YY+QGARFAKWRTVVSIP GPSALAVKEAAWGLARYAAISQDNGLV
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLV 173          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.815e-64
Identity = 125/173 (72.25%), Postives = 144/173 (83.24%), Query Frame = 1
Query:  190 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLV 708
            G Y EEL+KTA T+AS GRGILA+DESNATCGKRL SIG++NTE NR+AYR+LL+T PGLG YISGAILFEETLYQST  GKKFVD ++E+NIVPGIKVDKGLVP P +   SWC GLDG  S + EYYK GARFAKWR+VVSIP GPS + +   A+GLARYAAI+Q+ GLV
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVPCP-TPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPS-IMLPRLAYGLARYAAIAQNAGLV 197          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.360e-53
Identity = 103/174 (59.20%), Postives = 131/174 (75.29%), Query Frame = 1
Query:  190 GAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLV 708
            G Y +EL+K AK IA+PG+GILA DES  T GKRLASI ++N E NRQA R+LL T+P    Y+SG ILFEETLYQ +++GK FV+ L+E N++PGIKVDKG+V L G++ E+  QG D L +R  +YYK GARFAKWR V+ I P  PS L++++ A GLARYA I Q+NGLV
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKIGPNEPSELSIQQNAQGLARYAIICQENGLV 179          
BLAST of CN187744 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.194e-52
Identity = 106/172 (61.63%), Postives = 127/172 (73.84%), Query Frame = 1
Query:  196 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLV 708
            Y +EL+KTAK IA+PGRGILA DES  T GKR A I ++NTE+NRQAYR+LL T+PG    +SG ILFEETLYQ T+DGK FVD L E  ++PGIKVDKGLV L G+N E+  QGLD L +R  +YY+ GARFAKWR    I    PS L+++E A  LARYA I Q+NGLV
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAIICQENGLV 179          
The following BLAST results are available for this feature:
BLAST of CN187744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC3_ARATH3.207e-9883.94Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_ORYSJ3.442e-8478.43Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA8.479e-8386.36Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC1_ARATH1.446e-8273.73Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH1.889e-8275.73Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC_SPIOL7.178e-8272.02Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC2_PEA1.354e-8085.55Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC_CHLRE8.815e-6472.25Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_PEA5.360e-5359.20Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH1.194e-5261.63Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004P01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187744 ID=CN187744; Name=CN187744; organism=Citrus sinensis; type=EST; length=710bp
GTTGTTCTTAGAAGGCCACGAAAAGTCGGATCCTCGAAATAATCACAAGC
AACAATGGCCTGGGCAAGTTTTGCGAAGCTAAATGCTGCGTCGTCTCAGT
GGATCGGTCAACAGTCCTTCACTCAACGCACCGGATCTTCTTCTTCGACT
CGATTCGCGACTCGCCGCGTCTCCGTCCCGATCCGAGCTGGCGCTTACAC
TGAGGAACTCGTCAAAACAGCTAAAACAATTGCATCACCTGGTCGCGGTA
TTCTAGCAATTGATGAATCAAATGCAACCTGTGGGAAGAGGTTGGCATCG
ATTGGATTGGACAATACAGAGACCAATAGACAGGCTTACAGGCAACTTTT
GCTGACCACTCCAGGCCTTGGTGATTATATTTCTGGTGCCATTCTTTTTG
AGGAGACACTGTACCAATCAACTACAGATGGAAAAAAGTTTGTGGACTGC
TTGCGTGAGGAAAATATCGTGCCTGGCATTAAAGTTGACAAGGGTTTGGT
TCCTCTACCAGGATCAAACAATGAATCGTGGTGCCAAGGCTTGGATGGAT
TGGCATCAAGATCCACTGAATACTACAAGCAAGGTGCTCGATTTGCTAAG
TGGAGGACAGTTGTTAGCATTCCATGTGGTCCTTCTGCTCTGGCTGTGAA
AGAAGCTGCATGGGGCCTTGCACGATATGCTGCTATTTCTCAGGATAATG
GACTTGTGCC
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