CX675505

Overview
NameCX675505
Unique NameCX675505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7723 contig Csv1_Contig7723:433..1277. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: GEK1_ARATH (D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GN=GEK1 PE=1 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 4.708e-89
Identity = 150/201 (74.63%), Postives = 173/201 (86.07%), Query Frame = -1
Query:  243 APPNPRIGPWLRLLKKIALSHNLVPEFEITLEGTHHGPVTSKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIIGFLSEQNIKVGKPNDF 845
            A P+ RIGPW RLLKK+A +H LVPEFEITLE THHGP+T+KPTMFLEIGSTEEYWKRQDAAQV+ALL+W+ LGLGG + VG W  E+ K KVLLGIGGGHYAPRHMDI LKDD+WV HLLSGYSLPMEDP+Q+K       IGG W+++IKAA+EAT+++FPGGEILAHLDHKSFKGWQK AI  FL+E++I VGKPNDF
Sbjct:  116 ALPSTRIGPWFRLLKKMAEAHGLVPEFEITLEATHHGPITNKPTMFLEIGSTEEYWKRQDAAQVMALLMWEGLGLGGSEEVGKWKSETGKRKVLLGIGGGHYAPRHMDIALKDDIWVGHLLSGYSLPMEDPTQTKTTPGENYIGGNWRQSIKAAFEATKASFPGGEILAHLDHKSFKGWQKKAITEFLAEESINVGKPNDF 316          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_HALMA (D-tyrosyl-tRNA(Tyr) deacylase OS=Haloarcula marismortui GN=dtdA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15
Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = -1
Query:  468 ALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSL 794
            AL  +  P++E+ +E THHGP     P+MF+E+GS E  W+  DAA+  A  I D       D   +  RE+   + LLG+GGGHYAPR   +V + D  V H+ + +SL
Sbjct:  122 ALQRHAPPDYEVGMECTHHGPTAVGVPSMFVEVGSAEPQWEDPDAAEAAARAILDL-----ADEPADRPRENGTRRHLLGVGGGHYAPRFERVVRETDWAVGHIAANWSL 226          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_ARCFU (D-tyrosyl-tRNA(Tyr) deacylase OS=Archaeoglobus fulgidus GN=dtdA PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14
Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = -1
Query:  471 PEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYS 773
            PEFE T+E THHGP   SKP+ F EIGSTEE WK ++AA+V+A  + D +     D    WN       V +G+GG HYAPR  +I+L       H  + Y+
Sbjct:  128 PEFEFTMEVTHHGPSEISKPSAFYEIGSTEEEWKDREAAEVVAEAMLDAIRAEKMD----WN-------VAVGVGGTHYAPRQTEIMLTTTFTFGHNFAKYT 218          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_METM5 (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=dtdA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.224e-13
Identity = 40/124 (32.26%), Postives = 69/124 (55.65%), Query Frame = -1
Query:  402 FEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKE-IGGTWK 767
            F+++ E  HHGP   K P+ F+EIGS+EE W+  DAA++I   + D L           N E +K + ++GIGGGHY+P+   + LK++ ++ +L   ++   E+     +  +  + +G  WK
Sbjct:  114 FDVSFEVLHHGPTDLKAPSAFVEIGSSEEQWQIDDAAEIITNSLIDTLN-------SIQNSEYEKKEKIIGIGGGHYSPKFTKLALKEEYYIGYLTPKHAKLSENILNQMISKQDFDFVGIDWK 230          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_METMP (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus maripaludis GN=dtdA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.183e-13
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = -1
Query:  402 FEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMED-PSQSKVDSESKEIGGTWK 767
            F+++ E  HHGP   K P+ F+EIGS+EE W+  DAA++I   + D L           N E D+ + ++GIGGGHY+P+   + L+++ +V +L   ++   E+  +Q     E   IG  WK
Sbjct:  114 FDVSFEVLHHGPTDLKAPSAFVEIGSSEEQWQIDDAAEIITNSLIDTLN-------SIQNSEYDEKEKIIGIGGGHYSPKFTKLALREEYYVGYLTPKHAKLSENILNQLTSKQEFDFIGIDWK 230          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_METM7 (D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=dtdA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 40/124 (32.26%), Postives = 69/124 (55.65%), Query Frame = -1
Query:  402 FEITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKE-IGGTWK 767
            FE++ E  HHGP   K P+ F+EIGS+EE W+  DAA++I   + D L           N E ++ + ++GIGGGHY+P+   + L+++ +V +L   ++   E+     +  +  + +G  WK
Sbjct:  114 FEVSFEVLHHGPTDLKTPSAFVEIGSSEEQWQIDDAAEIITNSLIDTLN-------SIQNSEYEEKEKIIGIGGGHYSPKFTKLALREEYYVGYLTPKHAKLSENILNQLISKQEFDFVGIDWK 230          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_AERPE (D-tyrosyl-tRNA(Tyr) deacylase OS=Aeropyrum pernix GN=dtdA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 53/183 (28.96%), Postives = 78/183 (42.62%), Query Frame = -1
Query:  261 LKKIALSHNLVPEFEITLEGTHHGPVT-SKPTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKEIGGTWKEAIKAAYEATRSAFPGGEILAHLDHKSFKGWQKNAIIGFLSEQNIKV 806
            L K +    L   +E+TLE THHGP T SKP +F E+GSTEE W+          L W+ L L   +A+    +   +     G GG HY P+H  + L+    + H +  Y+                   G   E +K    A   ++PG   +A ++ KS K  Q+  +     E   KV
Sbjct:  121 LAKASRETGLAESYEVTLEATHHGPTTPSKPVVFAELGSTEEDWRNP--------LGWETLALAVEEAIKTLPQIERECIPAAGFGGTHYVPKHTRLQLESGYCIGHTIPRYAFDR----------------GVTAEVLK---NAILKSYPGPARVALVEKKSLKSPQRRMVEEASEEAGAKV 276          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_PYRFU (D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus furiosus GN=dtdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = -1
Query:  420 ITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPMEDPSQSKVDSESKE 761
            +  E THHGP   + P++F+EIGS+EE W    A ++IA  I   L            ++ +K KV LGIGGGHYAP+   + L+ D+  +H+L  Y+ P++     +  S S E
Sbjct:  134 VCYEATHHGPSELEVPSLFIEIGSSEEEWVNDRAGEIIAETIMYVL------------KKREKFKVALGIGGGHYAPKQTKVALESDLAFSHILPKYAQPVKKEVILRALSRSTE 236          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_PYRHO (D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus horikoshii GN=dtdA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = -1
Query:  462 ITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPM 761
            +  E THHGP   + P+ F+EIGS+EE W    A ++IA  I   L         N+ +   K KV LGIGGGHYAP+     L+ D+   H+L  Y+ P+
Sbjct:  134 VCYEATHHGPTELEVPSFFIEIGSSEEEWINDRAGEIIAETIIYVLD--------NYEKGRSKFKVALGIGGGHYAPKQTKRALEGDLAFGHILPKYAQPV 226          
BLAST of CX675505 vs. ExPASy Swiss-Prot
Match: DTDA_PYRAB (D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus abyssi GN=dtdA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = -1
Query:  462 ITLEGTHHGPVTSK-PTMFLEIGSTEEYWKRQDAAQVIALLIWDELGLGGGDAVGNWNRESDKNKVLLGIGGGHYAPRHMDIVLKDDVWVAHLLSGYSLPM 761
            +  E THHGP   + P+ F+EIGS+EE W    A ++IA  I   L           N E+ K KV LGIGGGHYAP+     L  D+   H+L  Y+ P+
Sbjct:  134 VCYEATHHGPSELEVPSFFIEIGSSEEEWVNDRAGEIIAETIVYVLD----------NYENSKFKVALGIGGGHYAPKQTKRALNSDLAFGHILPKYAQPV 224          
The following BLAST results are available for this feature:
BLAST of CX675505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GEK1_ARATH4.708e-8974.63D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana... [more]
DTDA_HALMA5.876e-1540.00D-tyrosyl-tRNA(Tyr) deacylase OS=Haloarcula marism... [more]
DTDA_ARCFU3.809e-1444.12D-tyrosyl-tRNA(Tyr) deacylase OS=Archaeoglobus ful... [more]
DTDA_METM53.224e-1332.26D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus mar... [more]
DTDA_METMP7.183e-1334.68D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus mar... [more]
DTDA_METM79.381e-1332.26D-tyrosyl-tRNA(Tyr) deacylase OS=Methanococcus mar... [more]
DTDA_AERPE9.381e-1328.96D-tyrosyl-tRNA(Tyr) deacylase OS=Aeropyrum pernix ... [more]
DTDA_PYRFU1.225e-1236.52D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus furios... [more]
DTDA_PYRHO7.942e-1239.60D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus horiko... [more]
DTDA_PYRAB7.942e-1240.59D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus abyssi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62F11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62F11-L22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675505 ID=CX675505; Name=CX675505; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTGGCATTCAAAAAATATATAAAGCACCAAGGCATACGTTTTT
ATATACATTTATGTCTACAGACAGTAACATACCTCTTCTGTCTTCTACAT
TTTTCTAATATAATAAGTATGTCTCAATCTCAAGCTCTTGGTCTTAGGCA
GCCTTCTCCTGAAGACCAATCTGCTGAATCCCCGAGCTTACTTATTTCTA
GAAATAATGAACCGTCCACAAGACCAAACATGATTATCAGATGAAATCAT
TCGGCTTGCCTACTTTGATATTCTGCTCACTTAGAAACCCAATAATGGCA
TTCTTCTGCCAGCCCTTAAAACTCTTGTGATCAAGATGTGCCAGAATCTC
CCCACCGGGAAAAGCTGATCTGGTAGCCTCGTATGCAGCTTTAATTGCTT
CTTTCCAAGTTCCACCAATTTCTTTCGATTCTGAATCCACTTTTGACTGG
CTTGGATCTTCCATAGGCAAGGAATATCCAGAAAGTAGGTGAGCTACCCA
AACATCATCTTTCAGAACTATGTCCATATGCCGAGGTGCATAATGTCCTC
CTCCGATTCCAAGAAGAACCTTGTTCTTGTCACTCTCCCTATTCCAGTTT
CCTACAGCATCGCCTCCTCCAAGTCCAAGTTCATCCCAAATTAATAGAGC
AATGACTTGAGCAGCGTCCTGTCTCTTCCAGTATTCTTCTGTACTACCAA
TCTCTAGGAACATAGTTGGCTTACTAGTCACAGGTCCATGGTGAGTACCC
TCTAATGTAATCTCAAATTCAGGAACTAAATTATGAGAGAGAGCAATTTT
CTTTAAAAGTCTGAGCCACGGGCCTATCCTAGGATTAGGCGGCGC
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