CN187734

Overview
NameCN187734
Unique NameCN187734
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.600e-78
Identity = 142/245 (57.96%), Postives = 182/245 (74.29%), Query Frame = 3
Query:   60 EQKMAQIGSSLLVPCVQELVKNPALV-VPDRYIRPDQDSPLISDDTLIS-QIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFE--NGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLN 782
            E K A   SS+LVP VQE+VK   +  VP RY+R DQD   + DD  +  +IP+IDM+             KLDFACKEWGFFQLVNHG+ ++FL+K+K E++ FFNL MEEKKK+WQ P ++EGFGQAFVVSE+QKLDWADLF     PV LRKPHLFPKLP   R+TLE+YS E++S+A+ LI+KM   L IK EE+ + F+  + VQ+MRMNYYPPCPQP++V+GL+PHSD+  LT+L+Q+N
Sbjct:    2 EAKGAAQWSSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVN 246          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.710e-42
Identity = 100/246 (40.65%), Postives = 138/246 (56.10%), Query Frame = 3
Query:   63 QKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPD--QDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDE----EMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLN 782
            + +  +G SL V  VQ L       +P+RY+RP+   D  +  D++L  +IPVID+             AK   AC +WGFFQL+NHG+    +EK+K + E FF L  +EK  Y Q P  MEG+GQAFV SEEQKLDWAD+  ++T PV  R    +P  P S RET+E YSMEL+ +A  L   M + L ++ E     +R  F    + +     P      + +GLSPHSDA  LT+L+Q+N
Sbjct:    3 KNLTGVGGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDELL-----PSMSSCGEGLGLSPHSDATGLTLLIQVN 241          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.090e-28
Identity = 74/236 (31.36%), Postives = 119/236 (50.42%), Query Frame = 3
Query:  105 VQELVKNPALVVPDRYIRPDQDSPLISDDTLIS------QIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMRE---FFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            V+ L K+  + +P  YIRP ++   I+D  L        Q+P ID++               +L  A  +WG   L+NHG+    +E++KK  E FF+LS+EEK+KY   Q  G ++G+G     +   +L+W D F  L  P   R   ++PK P    E    Y+  L+ LA  +   +   L ++ + + +     E  +  M++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 242          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.244e-26
Identity = 60/211 (28.44%), Postives = 110/211 (52.13%), Query Frame = 3
Query:  150 YIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 776
            ++R + + P ++ +   ++IP+I +                K+  AC++WG FQ+V+HG+ +  + ++ +    FF L  EEK +Y    G   GF  + V+  +  +DW +  +  + P++ R    +PK P   R T EVYS +L  L   L+  + E + ++  ++ +   +  Q + +NYYP CPQP+  +G+  H+D   +TILLQ
Sbjct:   19 FVRDEDERPKVAYNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQ 229          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.530e-26
Identity = 75/244 (30.74%), Postives = 117/244 (47.95%), Query Frame = 3
Query:   93 LVPCVQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQXXXXXXXXXXXXAK------LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMRE---FFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            + P V+ L  +    +P  YIRP ++   I +           Q+P ID++             +      L  A  EWG   LVNHG+S   + ++K   E FFNL MEEK+KY   Q  G + G+G     +   +L+W D F  L  P   R   ++PK P         YS++L+SLA  ++S +   L +++  + +     E  +   ++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:    5 VAPRVESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFIL 248          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.232e-25
Identity = 66/239 (27.62%), Postives = 118/239 (49.37%), Query Frame = 3
Query:   99 PCVQELVKNPALVVPDRYIRPDQDSPLISDDTLIS-------QIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF---ENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            P V+EL ++    +P  Y+RP+++   I  + L         Q+P ID++               +L  A  +WG   L+NHG+    ++++K   + FF L +EEK+ Y   Q  G+++G+G     +   +L+W D F     P H     ++P  PP        Y+ +L++LA  ++S +   L ++   + +     E+ +  M++N+YP CPQPE  +G   H+D +ALT +L
Sbjct:   10 PRVEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFIL 248          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.232e-25
Identity = 69/236 (29.24%), Postives = 115/236 (48.73%), Query Frame = 3
Query:  105 VQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMRE---FFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            V+ L  +    +P  YIRP  +   I D      +    Q+P ID++               KL  A  +WG   LVNHG+S   ++K++K  + FF+L +E+K+KY   Q  G ++G+G     +   +L+W D F     P   R   ++P+ P    E    Y+ +L+ LA  ++  +   L + +  + +     E  +  M++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:   11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 246          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.231e-24
Identity = 68/235 (28.94%), Postives = 117/235 (49.79%), Query Frame = 3
Query:  105 VQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQXXXXXXXXXXXXA-KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREF---FENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            V+ L K+    +P  Y+RP ++   I +           Q+P ID++              +L  A  EWG   LVNHG+S   + ++K   E FF+  +EEK+KY   Q  G+++G+G     S   +L+W D F     P   R   ++PK P         Y+ ++++LA  +++ +   L +++  + +     E+ +  M++NYYP CPQPE  +G+  H+D +ALT +L
Sbjct:   12 VESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 246          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.743e-24
Identity = 69/222 (31.08%), Postives = 107/222 (48.20%), Query Frame = 3
Query:  138 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH--LRKPHLFPKLPPSLRETLEVYSM---ELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLN 782
            +P ++I P+ +SP   D      +P+ID+                 +  AC+  GFFQ+VNHG+    L    + V+ FF + + EK++  +HPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYPPC +P + +G  PH D  +LTIL Q N
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN 237          
BLAST of CN187734 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.743e-24
Identity = 67/218 (30.73%), Postives = 112/218 (51.38%), Query Frame = 3
Query:  138 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFN-LSMEEKKKYWQHPG--DMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF--ENGVQAMRMNYYPPCPQPEKVMGLSPHSDAAALTILL 773
            +P  YIR + + P  +    ++ ++PVID+              ++  A KEWG FQ++NHG+    +E L+K  + FF  +  EEK+   + PG   +EG+G +     E K  W D       P        +PK PPS RE  E Y+  L+ +A+ +   +   L ++  EM E    E+ V  +++NYYPPCP+P+  +G+  H+D + +T+L+
Sbjct:   33 IPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVK--EIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLV 248          
The following BLAST results are available for this feature:
BLAST of CN187734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
SRG1_ARATH9.600e-7857.96Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA1.710e-4240.65S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_ARATH4.090e-2831.36Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FNSI_PETCR2.244e-2628.44Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_VITVI6.530e-2630.74Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_PERFR4.232e-2527.62Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
LDOX_MALDO4.232e-2529.24Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_PETHY1.231e-2428.94Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
GAO1D_WHEAT2.743e-2431.08Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
FLS_SOLTU2.743e-2430.73Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004O19_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004O19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187734 ID=CN187734; Name=CN187734; organism=Citrus sinensis; type=EST; length=783bp
ATGACTCAGTCTTGTTCCAAAATCAATACAAAGCTGCAGCAATCTTGAAA
GGATTTGAGGAACAAAAGATGGCCCAGATTGGAAGTTCTCTCCTTGTGCC
TTGTGTTCAAGAGTTGGTCAAGAATCCTGCGTTAGTTGTCCCCGACAGAT
ACATACGTCCAGATCAAGATTCACCACTCATTTCTGATGATACTTTGATT
TCACAGATACCAGTTATTGACATGCAAAGCTTACTTTCTGAAGAATCAAT
GGATTCTGAGCTAGCCAAGCTCGACTTCGCATGCAAAGAATGGGGTTTTT
TCCAGCTGGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAG
AAAGAGGTTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATA
TTGGCAGCATCCAGGAGATATGGAAGGCTTTGGACAAGCCTTTGTTGTAT
CTGAGGAACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGCTGACTCTT
CCAGTTCATCTGAGGAAGCCACACTTATTTCCTAAGCTCCCTCCTTCCCT
CAGAGAGACCTTGGAAGTTTACTCAATGGAATTAAAATCCCTAGCCGAGA
ACCTAATATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATG
AGAGAATTCTTTGAAAATGGAGTGCAAGCAATGAGGATGAATTATTACCC
TCCATGTCCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCACATTCTGATG
CAGCTGCACTTACCATTCTGCTACAACTTAATG
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