CX675468

Overview
NameCX675468
Unique NameCX675468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:178..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 6.947e-49
Identity = 98/192 (51.04%), Postives = 128/192 (66.67%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSG---PSILPSDPYDRAVARFWAAYVDEKLFPA-LKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP-ETDKLAEFAKVLAKLRAS 563
            KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W       PS++PSDPY+RAVARFWAAYVD+K+ PA L  +  +   E + AA+ Q +  L  LE AF +CS GKPFFGG  +GF+D+  G YLGW    +K+I  +L+D  +TP L  W ERF A  A K V+P + DKL EF + L +  AS
Sbjct:   42 KSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTLLRWSAS 233          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.896e-38
Identity = 84/181 (46.41%), Postives = 109/181 (60.22%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 545
            KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       KP+FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:   41 KSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.517e-38
Identity = 83/181 (45.86%), Postives = 109/181 (60.22%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 545
            KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       +P+FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:   41 KSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.347e-35
Identity = 76/180 (42.22%), Postives = 114/180 (63.33%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPAL-KSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAK 539
            KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K+  A+ KS+ + D  E +E  +E+  E L  LE+        K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P  D L  + K
Sbjct:   43 KSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKE-REKNVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.709e-35
Identity = 78/189 (41.27%), Postives = 117/189 (61.90%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQI--GFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 545
            KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K +PAL ++  A    A+  A E     L LLE+AF   S G+ FF G     G LD+A GC+L  +R  E++  + L+D   TP L  W++RF A  A K V+P+T+K+ +F + L
Sbjct:   37 KSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFL 225          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.245e-31
Identity = 77/191 (40.31%), Postives = 112/191 (58.64%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL-----AEFAKVLAKLRA 560
            KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K+   + +       E +E   E++ E L +L++        K FF G + GF DIA      W+ V E+   V L+   K P   +W + +   + VK+ +P  D+L     A F  V+A + A
Sbjct:   39 KSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVASISA 221          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.245e-31
Identity = 74/177 (41.81%), Postives = 106/177 (59.89%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 533
            KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   +K+       E +E   E++ E L +L++        K FF G + GF DIA      W+ V E+   V L+   K P   KW   +   + +K+ +P  D+L  F
Sbjct:   39 KSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF--LRKGEEQEKDKEEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.532e-31
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 533
            KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K+   + +       E +E   E++ E L +L++        K FF G + GF DIA      W+ V E+     L+   K P   KW + +   + V + +P  D+L  F
Sbjct:   39 KSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.114e-30
Identity = 73/177 (41.24%), Postives = 101/177 (57.06%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 533
            KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K++   + + S  G E +E A ++ IE L  LE         K +FGG  +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P   K+  F
Sbjct:   41 KSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209          
BLAST of CX675468 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.482e-30
Identity = 68/174 (39.08%), Postives = 99/174 (56.90%), Query Frame = 3
Query:    3 KSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSXGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 524
            +S LLL+ NP+HKKIPVLIHN KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K++   K +  + G E +E   ++LI     LE+        KPF+G    GF+D+    +  W    E     K+  E + P L  W +R      V + +P+  K+
Sbjct:   40 RSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGK-KELISIFKQLEETLT----DKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
The following BLAST results are available for this feature:
BLAST of CX675468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ6.947e-4951.04Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX4_TOBAC1.896e-3846.41Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC5.517e-3845.86Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX6_SOYBN3.347e-3542.22Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_MAIZE5.709e-3541.27Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTX3_TOBAC2.245e-3140.31Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC2.245e-3141.81Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC6.532e-3141.81Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC1.114e-3041.24Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX3_SOYBN2.482e-3039.08Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62E01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62E01-J2-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675468 ID=CX675468; Name=CX675468; organism=Citrus sinensis; type=EST; length=578bp
CCAAAAGCGAGCTTCTGCTTAAATCAAACCCTGTTCACAAGAAAATCCCA
GTTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCTCATCATTGTCGA
GTACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTG
ATCCTTATGACCGTGCCGTTGCTCGTTTCTGGGCCGCTTATGTTGATGAG
AAGTTGTTCCCTGCCTTGAAAAGCATTGGTAGTGCAGATGGAGCGGAAGC
TAAGGAAGCTGCGATTGAGCAATTGATTGAAGGCTTGGTTTTGCTGGAGG
ATGCTTTTGTTAAGTGTAGCANAGGGAAGCCTTTCTTTGGTGGAAGCCAA
ATTGGGTTTCTTGACATTGCATTTGGTTGCTACTTGGGATGGGTGAGAGT
GACAGAGAAAATGATTGAGGTGAAGCTCCTTGATGAAGTCAAAACTCCTG
GACTGTTCAAATGGGCTGAGAGATTCTGTGCTGATGCCGCTGTCAAAGAT
GTTATGCCTGAGACTGATAAGCTTGCAGAGTTTGCTAAGGTTCTTGCCAA
ACTCAGAGCTTCTGGCAAATGGAATTAA
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