CN187653

Overview
NameCN187653
Unique NameCN187653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.076e-78
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 2
Query:   74 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 673
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.076e-78
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 2
Query:   74 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 673
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.242e-78
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 2
Query:   74 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 673
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.990e-77
Identity = 139/200 (69.50%), Postives = 165/200 (82.50%), Query Frame = 2
Query:   74 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 673
            YDPSPLQD CVAI++ K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVL  GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   23 YDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKFRN 222          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.022e-76
Identity = 139/199 (69.85%), Postives = 163/199 (81.91%), Query Frame = 2
Query:   77 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 673
            DPSPLQD CVAI + K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 222          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 5.607e-75
Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 2
Query:    8 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 667
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N+GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.323e-75
Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 2
Query:    8 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 667
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N+GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.249e-74
Identity = 138/220 (62.73%), Postives = 169/220 (76.82%), Query Frame = 2
Query:    8 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 667
            M+  Q LI FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ NIGK  A+A++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.443e-72
Identity = 134/198 (67.68%), Postives = 158/198 (79.80%), Query Frame = 2
Query:   74 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 667
            YDPSPLQD CVA+++   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EIL+V+EGTL VGFVTS+Q NN L SKVL  GD FVFPIG+IHFQ N+G+TNAVA++ L SQ PG ITIADAVFG+ P I P+ LAKAFQLD   VK L+ +F
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARF 221          
BLAST of CN187653 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 2.064e-69
Identity = 126/222 (56.76%), Postives = 161/222 (72.52%), Query Frame = 2
Query:    2 VTMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTTNRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 667
            +T+K++ FL   ++           DPSPLQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EIL+V +GTL VGF++S+Q  N L +K LN GD FVFP GLIHFQFN+G T AVA +AL+SQ  G ITIA+ +FG+ P ++P+ LA+AFQ+D   V++LQ +F
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          
The following BLAST results are available for this feature:
BLAST of CN187653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH7.076e-7870.50Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH7.076e-7870.50Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH9.242e-7870.50Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH5.990e-7769.50Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH1.022e-7669.85Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL118_ARATH5.607e-7562.73Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH7.323e-7562.73Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH1.249e-7462.73Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH4.443e-7267.68Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH2.064e-6956.76Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0004M20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004M20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187653 ID=CN187653; Name=CN187653; organism=Citrus sinensis; type=EST; length=760bp
AGTTACCATGAAGGCAATTCAATTTCTTATAGGTTTTGCTGTCTTGGCTT
TGGCTTCTTCTTTGGCCTCTGCCTATGACCCTAGCCCTCTTCAAGATATC
TGTGTAGCCATCAATAACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTT
CTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTTTCCGGGC
TTGGCAAGCCTGGAAACACAACAAATCGACTTGGTGTTGATGAAACAGAT
GCAAATGTGGAGCAAATTCCAGGACTCAATACCCTTGGCATATCAGCATT
CCGTATTGACTATGCGCCATATGGCCAAAGGCCACCTCATATTCACCCCC
GTGCCAGTGAAATCCTGTTGGTCCTGGAAGGAACTCTTCACGTCGGTTTT
GTGACATCAGACCAACTGAATAACACACTCATCTCAAAAGTTCTGAATAA
GGGAGATGCTTTTGTGTTTCCAATTGGTTTGATTCATTTCCAATTCAACA
TTGGAAAAACAAATGCAGTTGCCTATTCTGCTCTAAACAGCCAGTTCCCC
GGTGAAATTACCATAGCCGACGCGGTCTTTGGAGCCAATCCTCCAATCAA
TCCCGATTTTCTTGCCAAGGCGTTCCAGTTGGACCCGAAGACAGTGAAAG
ATCTTCAGCATAAGTTCATTAATGGCGATTAGGAGAAGGAATTAATGAGC
TTTAATATAAATGGCCTCTTCACTAGTGGCTTTATTGTTTTAGCTCCAGA
TTATCATATC
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