CK938248

Overview
NameCK938248
Unique NameCK938248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK938248 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.068e-47
Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 3 
Query:  396 LNLDAAFEQKNEIAKAVEEELERAMSHYGYEIVQTLIVDIEPDVHVKRAMNXXXXXXXXXXXXXXXXXXXXXLQIKRAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDIATQIREGLL 899
            +NLD  FEQK E+AK+V EELE+ M  YGY I   L+VDI PD  V+RAMN                     LQ+KRAE EAEAKYL G+G+ARQRQAI DGLR+++L FS  V GT++K+VMD++++TQYFDT+K++G SSK+++VFIPHGPG V+DI  QIR GL+
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLM 168
The following BLAST results are available for this feature:
BLAST of CK938248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.068e-4755.95Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004476_C07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IIF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938248 ID=CK938248; Name=CK938248; organism=Citrus sinensis; type=EST; length=944bp
GGGGAAGCCACATTTGTTTCTTGTTTCAAAAGCAACTCTTTTGCAGGTTG
CAGTTTTGAAAGATGGGTCAAACGTTGGGCTGCATTCAGGTGGAGCAGTC
AAAAGTAGTCATCAGAGAACAATTTGGAAAGTTTGATCATGTGCTTGAAC
CTGGGTGTCAATGCTTGCCTTGGTGCCTTGGCTACAAGGTAGCTGGTCGG
CTTTCACTCCGGGTGCAACAACTGGATGTTAAATGTGAAACAAAGACTAA
GGATAATGTTTTTGTCAATGTGGTTGCTTCCGTTCAATATCGTGCCTTGG
CTGATAAAGCTTATGATGCTTTCTATAAGCTCTCCAACACCAGGGGCCAA
ATCCAAGCCTATGTCTTTGATGTTATCAGGGCAAGCGTACCAAAACTGAA
CTTAGATGCCGCCTTTGAGCAGAAGAATGAAATTGCCAAAGCCGTTGAAG
AGGAGCTCGAAAGGGCCATGTCTCATTATGGGTATGAGATAGTGCAGACT
CTTATTGTGGATATTGAGCCAGATGTTCATGTAAAGAGAGCAATGAATGA
GATCAATGCAGCTGCAAGACTGAGGCTGGCAGCAAATGAGAAGGCTGAGG
CAGAGAAGATATTGCAAATCAAACGAGCTGAAGGGGAGGCTGAGGCAAAA
TACCTGTCCGGACTTGGGATAGCACGTCAGCGCCAGGCTATTGTTGATGG
GTTAAGAGACAGTGTGCTTGCCTTCTCTGAGAATGTTCCTGGAACAACCT
CCAAGGATGTCATGGACATGGTTCTGGTGACTCAATACTTCGACACCATG
AAGGAGATCGGAGCATCCTCGAAGTCCTCATCTGTTTTTATCCCACATGG
ACCTGGTGCTGTTAAGGACATTGCTACACAAATCAGGGAGGGACTCCTTC
ANGCCAAATCAGTTCAGAANTNGATATTCTGCTGNNNTGCAANG
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