CX675455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: SKP1B_ARATH (SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 6.692e-59 Identity = 114/171 (66.67%), Postives = 128/171 (74.85%), Query Frame = 2 Query: 2 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPA---TQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 MS+ + I LKS DGE+FE++EAVALES TIKHMIEDDC D GIPLPNVT KIL+KV+EYCK+HVE T +EDLK+WD++F+KVDQ TLFDLILAANYLNI GLLDLTCQTVADMIKGKTPEEIRKTFNI+NDFTP NQWAFE Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: SKP1A_ARATH (SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.947e-58 Identity = 113/166 (68.07%), Postives = 126/166 (75.90%), Query Frame = 2 Query: 8 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 S K IVLKS DGESFEVEEAVALES TI HM+EDDC D G+PLPNVT KILAKV+EYCK+HVE A++ ++DLK+WD DF+K+DQATLF+LILAANYLNI LLDLTCQTVADMIKGKTPEEIR TFNI+NDFTP NQWAFE Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASK-------AEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.228e-54 Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 2 Query: 14 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 KMI+LKS DGESFE+EEAVA++S TIKHMIEDDCAD GIPLPNVTG ILAKV+EYCKKHVE A ++LK+WD++FVKVDQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE++R FNI+ND+TP N+WAFE Sbjct: 6 KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAE------NDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.222e-52 Identity = 103/164 (62.80%), Postives = 118/164 (71.95%), Query Frame = 2 Query: 14 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 KMI+LKS DGESFEVEEAVA+ES TIKHMIEDDC D GIPLPNVTG ILAKV+EYCKKHVE A +LK+WD DFVKVD TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNI+ND+TP N+WAFE Sbjct: 6 KMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKKHVEAAA------EAGGDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK11_ARATH (SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.685e-50 Identity = 102/166 (61.45%), Postives = 114/166 (68.67%), Query Frame = 2 Query: 8 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC GIPL NV KIL KV+EYCKKH A EEDL +WD F+ ++Q+T+F+LILAANYLNI LLDLTCQTVADMIKGKTPEEIR TFNI NDFTP NQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANP---------------ISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK12_ARATH (SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.399e-48 Identity = 101/167 (60.48%), Postives = 113/167 (67.66%), Query Frame = 2 Query: 8 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKK-HVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 S KMIVL S DG+SFEVEEAVA++S TI HM+EDDC GIPL NV KIL KV+EYCKK HV+ EEDL WD F+ ++Q+T+F+LILAANYLNI L DLTCQTVADMIKGKTPEEIR TFNI NDFTP NQWAFE Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKYHVD----------------EANPISEEDLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE 152
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43 Identity = 90/166 (54.22%), Postives = 110/166 (66.27%), Query Frame = 2 Query: 14 KMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKV--DQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 KM++L S DGESF+VEEAVA++S TI HMIEDDC G+P+ NVTG IL+KV+EYCKKHV + + +++LK WD +F+K +TLFD++LAANYLNI LLDL CQTVADMI GK P+EIR I NDFTP NQWAFE Sbjct: 3 KMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTE--------------ESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 7.433e-42 Identity = 91/166 (54.82%), Postives = 102/166 (61.45%), Query Frame = 2 Query: 8 SPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 S K I+LKS DG SFEVEE A + TI HM EDDC D GIPLP VTGKIL V+EYC KH V A +EDLK WD +F++ Q+T+FDLI+AANYLNI LLDL CQTVADMIK T E RK FNI ND+T NQW FE Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCNKH-HVDAANPCS--------------DEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.268e-41 Identity = 95/169 (56.21%), Postives = 109/169 (64.50%), Query Frame = 2 Query: 2 MSSPKMIVLKSCDGESFEVEEAVALESTTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVK-VDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 MSS K IVL S DGESFEVEEAVA + ++HMIEDDC +PL NVTGKIL+ VVEYCKKHV ++ K+WD +F+K DQ T+F L+LAANYLNI GLLDL+ QTVAD IK KTPEEIR+ FNI NDFTP N WAFE Sbjct: 1 MSSNK-IVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHV-------------------VDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of CX675455 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.656e-41 Identity = 90/167 (53.89%), Postives = 106/167 (63.47%), Query Frame = 2 Query: 8 SPKMIVLKSCDGESFEVEEAVALE-STTIKHMIEDDCADXGIPLPNVTGKILAKVVEYCKKHVEVPATQDXXXXXXXXXXXXXXXXEEDLKSWDTDFVKVDQATLFDLILAANYLNIXGLLDLTCQTVADMIKGKTPEEIRKTFNIRNDFTPXXXXXXXXXNQWAFE 505 S K I+LKS DG SFEVEE A + I HM E+DC D GIPLPNVTGKILA V+EYC KH V A ++DLK WD +F++ D +T+FDLI AANYLNI L DL CQTVA++IKG TPE+IR+ FNI ND TP N+WAFE Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCNKH-HVDAANPCS--------------DDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153 The following BLAST results are available for this feature:
BLAST of CX675455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675455 ID=CX675455; Name=CX675455; organism=Citrus sinensis; type=EST; length=626bpback to top |