CN187578

Overview
NameCN187578
Unique NameCN187578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: FHIT_BOVIN (Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23
Identity = 57/114 (50.00%), Postives = 73/114 (64.04%), Query Frame = -1
Query:  342 LPGHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYR 680
            +PGHVLVCP R   RF D++ +E  DL+  AQ VGT +E + + +SL F++QDGP+AGQTV HVH+HI+PRKA     ND   D  EK  + D D     R+ EEMA EA   R
Sbjct:   32 VPGHVLVCPLRPVERFRDMSPEEVADLFQAAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHRNDSIYDALEKHDREDKDSPALWRSEEEMAAEAAALR 145          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: FHIT_HUMAN (Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.183e-22
Identity = 55/113 (48.67%), Postives = 70/113 (61.95%), Query Frame = -1
Query:  342 LPGHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYR 680
            +PGHVLVCP R   RF DL  DE  DL+ T Q VGT +E +   +SL F++QDGP+AGQTV HVH+H++PRKA     ND   +  +K   + D     R+ EEMA EA   R
Sbjct:   32 VPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKE-DFPASWRSEEEMAAEAAALR 143          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: FHIT_DICDI (Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium discoideum GN=fhit PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22
Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = -1
Query:  327 LPGHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLLSK 680
            LPGHVLVCP+R   R  DLT +E  DLWL+AQ + + +E +     + FAIQDG  AGQTV HVHIHI+PRK    E ND   +  EK++       + R+ EEM +E+ E R L  +
Sbjct:   33 LPGHVLVCPKRIVPRVKDLTKEEFTDLWLSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHIHIIPRKKFDFENNDQIYNEIEKER-------EPRSYEEMEKESSELRPLFEE 143          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: FHIT_RAT (Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegicus GN=Fhit PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21
Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = -1
Query:  339 LPGHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYRS 680
            +PGHVL+CP R   RF DL  DE  DL+   Q VGT +E + + +S+ F++QDGP+AGQTV HVH+HI+PRK+     ND   D  +K  + + D     R+ EEMA EA+  R+
Sbjct:   32 VPGHVLMCPLRPVERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPRKSGDFRRNDNIYDELQKHDREEEDSPAFWRSEEEMAAEAEVLRA 146          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: FHIT_MOUSE (Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN=Fhit PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = -1
Query:  342 LPGHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYR 680
            +PGHVLVCP R   RF DL  DE  DL+   Q VGT +E + + +S+ F++QDGP+AGQTV HVH+H++PRKA     ND   D  +K  + + D     R+ +EMA EA+  R
Sbjct:   32 VPGHVLVCPLRPVERFRDLHPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPRNDNIYDELQKHDREEEDSPAFWRSEKEMAAEAEALR 145          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.495e-20
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  333 GHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLL 674
            GHVLV P+R   R  DLT  ET DL++ A+ V   LE +H  +S    +QDG  AGQTVPHVHIHI+PR+A    +N+  + +    K   + + K R+ E+MA+EA  YR+L+
Sbjct:  330 GHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGDNEIYQKLASHDK---EPERKPRSNEQMAEEAVVYRNLM 440          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: APH1_SCHPO (Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Schizosaccharomyces pombe GN=aph1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17
Identity = 55/145 (37.93%), Postives = 70/145 (48.28%), Query Frame = -1
Query:  327 LPGHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEEND-------------------GNK--------DVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLLSK 680
            LPGHVLV P+R   R  DLT  E  DL+ + + V   +E    AS+    IQDG  AGQTVPHVH+HI+PRK A   END                   GN+            +Q +  D   K RT+EEM +EA   +   S+
Sbjct:   33 LPGHVLVIPQRAVPRLKDLTPSELTDLFTSVRKVQQVIEKVFSASASNIGIQDGVDAGQTVPHVHVHIIPRKKADFSENDLVYSELEKNEGNLASLYLTGNERYAGDERPPTSMRQAIPKDEDRKPRTLEEMEKEAQWLKGYFSE 177          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: NFT1_DROME (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13
Identity = 48/118 (40.68%), Postives = 62/118 (52.54%), Query Frame = -1
Query:  324 GHVLVCPRRDAVRFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMK-NRTMEEMAQEADEYRSLLSKI 674
            GHVLV  +R   R   L   E  D++ T   V   LE  ++ +S    +QDG QAGQTVPHVH HI+PR+      ND     +   KLD   + K  RT+EE  +EA  YR  L+ I
Sbjct:  347 GHVLVSTKRVTPRLCGLDCAEMADMFTTVCLVQRLLEKIYQTTSATVTVQDGAQAGQTVPHVHFHIMPRRLGDFGHND-----QIYVKLDERAEEKPPRTIEERIEEAQIYRKFLTDI 459          
BLAST of CN187578 vs. ExPASy Swiss-Prot
Match: HNT2_YEAST (Hit family protein 2 OS=Saccharomyces cerevisiae GN=HNT2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = -1
Query:  468 LPGHVLVCPRRDAV-RFGDLTADETRDLWLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPR 680
            +PGHVL+ P R  V    DLT  E++D + T Q +   ++  +KA S+  AIQDGP+AGQ+VPH+H HI+PR
Sbjct:   33 VPGHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSVPHLHTHIIPR 104          
The following BLAST results are available for this feature:
BLAST of CN187578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
FHIT_BOVIN1.825e-2350.00Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=F... [more]
FHIT_HUMAN1.183e-2248.67Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN... [more]
FHIT_DICDI1.545e-2246.61Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium d... [more]
FHIT_RAT1.001e-2146.09Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegic... [more]
FHIT_MOUSE1.308e-2146.49Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN... [more]
NFT1_CAEEL5.495e-2044.74Nitrilase and fragile histidine triad fusion prote... [more]
APH1_SCHPO4.354e-1737.93Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] ... [more]
NFT1_DROME1.311e-1340.68Nitrilase and fragile histidine triad fusion prote... [more]
HNT2_YEAST1.110e-1248.61Hit family protein 2 OS=Saccharomyces cerevisiae G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0004K23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004K23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187578 ID=CN187578; Name=CN187578; organism=Citrus sinensis; type=EST; length=680bp
TTTTTTTTTTTTATTCAACATTTATCATGACATTAGTAACGAATGTAGCT
CAAAACTAAATACAACACACTTAGATTGATAAAAGACATGCATAATAAAC
TTAGAATTTCAGGAATTCCAGCGCAACAAGAGGACGAGTGAAGGATTATT
CTGCATAGGTATGATGTATAATAATTCTATGAAAGCCCCAATGCTTAGCG
TAAGTATTATAAATGTTTATAAACTTCCATGAAGTATTATTGAAGGGCAG
TTTCTTAAATCTCAAACGCATTGGAGGCAGCTTTGATGAAAGCTTGAGAA
AAGCTTAGCGAAAGGCAGTGTTAAATTTTTGACAAAAGCGACCTGTACTC
ATCAGCCTCTTGAGCCATCTCCTCCATGGTCCTGTTCTTCATTTGAATAT
CTAAATCAAGCTTCTGCTTCTCCTTCACATCTTTATTCCCATCATTTTCC
TCAGAGCTGGCAGCTTTGCGTGGGACAATATGGATGTGAACATGGGGCAC
TGTCTGTCCAGCTTGAGGTCCATCTTGAATGGCAAATGCTAGTGATGAAG
CCTTGTGGTAGCTTTCGAGCTGTGTGCCAACTGTCTGGGCCGTGAGCCAT
AAATCACGGGTCTCATCAGCAGTAAGATCACCAAAGCGAACCGCGTCACG
CCTTGGGCAGACAAGCACATGACCAGGAAG
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