CN187577

Overview
NameCN187577
Unique NameCN187577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN187577 vs. ExPASy Swiss-Prot
Match: Y4966_ARATH (Uncharacterized protein At4g29660 OS=Arabidopsis thaliana GN=EMB2752 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 3 
Query:    3 IAAATLKQLYKEKYWEDPPGEAVPLMRPTFYGGPWKVYKGDTL 131
            I AA  +QLYKEK+WE+ PG+ VPLM+P FY GPW+VY+G+ +
Sbjct:   54 IGAAVTEQLYKEKFWEEHPGKTVPLMKPVFYRGPWRVYRGEAI 96
The following BLAST results are available for this feature:
BLAST of CN187577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4966_ARATH2.643e-1160.47Uncharacterized protein At4g29660 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0004K22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0004K22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187577 ID=CN187577; Name=CN187577; organism=Citrus sinensis; type=EST; length=518bp
TGATTGCCGCTGCTACTTTAAAGCAACTCTACAAGGAGAAGTATTGGGAA
GATCCCCCTGGTGAAGCTGTGCCGCTCATGCGGCCAACATTTTATGGTGG
TCCCTGGAAGGTTTACAAGGGGGATACCCTGCCCCAAAATATGTGAATTG
GAGTCGTGTTGAAGCTACTTCCTTTCTACTTGTGTTTATTGTACAAAGGT
CACAGGTTTTGGAGGCACGTATTGATCAAATATTATTCTTGGCAAAAAAT
AACTTTCATGTCAAAATGATGCATAGCCTGTGAGAGCGGAAAAAATAAAG
AAAAGAAAGCTTCATCCCCAATTGATTATGTAAGCATATGGAGAGACCTT
GGTGTTCTGTGATATCAAAGAGATGCCTCTGACTTTGTATGGGGAATGCT
TCATTTTGTGAAATGAATAACCTGTTGAGAATGTAATGGGGGCAAATTTG
ATATTCTTCACCCATGTCAGGGATGTTTATAGACCCCTTATTTTGGGACT
CCTTTTCATCTAAAAAAA
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