CK938083

Overview
NameCK938083
Unique NameCK938083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUVR5_ARATH (Histone-lysine N-methyltransferase SUVR5 OS=Arabidopsis thaliana GN=SUVR5 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 5.643e-63
Identity = 114/178 (64.04%), Postives = 138/178 (77.53%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGE---GYPCHCGASKCRGRL 530
            N  C C RTC NRVL+NG+R KLEVF+TE+KGW +RA + ILRGTFVCEYIGEVLD+ E NKRR++YG   C Y+L+I A+IND+GRL+E ++ Y IDAT +GN+SRFINHSC PNLVNHQV+VESM+   AHIGLYAS DIA GEE+T DY    +  E    +PCHC A+ CRG L
Sbjct:  936 NKFCGCSRTCQNRVLQNGIRAKLEVFRTESKGWGLRACEHILRGTFVCEYIGEVLDQQEANKRRNQYGNGDCSYILDIDANINDIGRLMEEELDYAIDATTHGNISRFINHSCSPNLVNHQVIVESMESPLAHIGLYASMDIAAGEEITRDYGRRPVPSEQENEHPCHCKATNCRGLL 1113          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: EHMT2_MOUSE (Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 OS=Mus musculus GN=Ehmt2 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.361e-31
Identity = 67/174 (38.51%), Postives = 106/174 (60.92%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--HYELLSGEGYPCHCGASKCR 521
            N  CSC R+C NRV+++G++V+L++++T   GW VRA Q I +GTF+CEY+GE++ + E +       R+   Y+ ++           +G+V Y IDA  YGN+SRFINH C PN++  +V +   D +   I  ++SRDI  GEEL +DY   +  +  + + C CG+ KC+
Sbjct: 1071 NQACSCWRSCKNRVVQSGIKVRLQLYRTAKMGWGVRALQTIPQGTFICEYVGELISDAEADV------REDDSYLFDLDNK--------DGEV-YCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQCGSEKCK 1229          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: EHMT2_HUMAN (Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 OS=Homo sapiens GN=EHMT2 PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 5.696e-31
Identity = 67/174 (38.51%), Postives = 105/174 (60.34%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--HYELLSGEGYPCHCGASKCR 521
            N  CSC R C NRV+++G++V+L++++T   GW VRA Q I +GTF+CEY+GE++ + E +       R+   Y+ ++           +G+V Y IDA  YGN+SRFINH C PN++  +V +   D +   I  ++SRDI  GEEL +DY   +  +  + + C CG+ KC+
Sbjct: 1018 NQACSCWRNCKNRVVQSGIKVRLQLYRTAKMGWGVRALQTIPQGTFICEYVGELISDAEADV------REDDSYLFDLDNK--------DGEV-YCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFPRIAFFSSRDIRTGEELGFDYGDRFWDIKSKYFTCQCGSEKCK 1176          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: EHMT1_HUMAN (Histone-lysine N-methyltransferase, H3 lysine-9 specific 5 OS=Homo sapiens GN=EHMT1 PE=1 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 5.696e-31
Identity = 71/174 (40.80%), Postives = 104/174 (59.77%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--HYELLSGEGYPCHCGASKCR 521
            NH CSC R C NRV++NG+R +L++++T + GW VR+ Q I  GTFVCEY+GE++ + E + R          Y+ ++           +G+V Y IDA  YGNVSRFINH C PNLV  +V +   D +   I  +++R I  GE+L +DY   +  + G+ + C CG+ KCR
Sbjct: 1075 NHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREED------SYLFDLDNK--------DGEV-YCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCR 1233          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV39_DROME (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila melanogaster GN=Su(var)3-9 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.692e-30
Identity = 73/186 (39.25%), Postives = 99/186 (53.23%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTEN-KGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--------HYELLS-GEGYPCHCGASKCRGRLY 533
            N  CSCD +C NR++++G +V L +FKT N  GW VRA  A+ +G FVCEYIGE++   E N+R   Y  +G  Y+ ++  +             Y IDA  YGN+S FINHSC PNL      +E ++    H+  +  R I  GEEL++DY         YE LS      C CG   CR  L+
Sbjct:  457 NSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYNTAQ-------DSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDYIRADNEDVPYENLSTAVRVECRCGRDNCRKVLF 635          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV39_DROPS (Histone-lysine N-methyltransferase Su(var)3-9 OS=Drosophila pseudoobscura pseudoobscura GN=Su(var)3-9 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.822e-30
Identity = 72/186 (38.71%), Postives = 100/186 (53.76%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTEN-KGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDY--------HYELLS-GEGYPCHCGASKCRGRLY 533
            N  CSCD +C NRV++NG +  L +FKT N  GW VR  Q + +G FVCEYIGE++   E N+R   Y  +G  Y+ ++  + +           Y +DA  +GN+S FINHSC PNL      +E ++    H+  +  R I  GEEL++DY         YE LS      C CGA+ CR  L+
Sbjct:  455 NSRCSCDESCTNRVVQNGRKHPLVLFKTSNGSGWGVRTPQPLKKGVFVCEYIGEIITCEEANERGKAYDDNGRTYLFDLDYNTSR-------DSEYTVDAANFGNISHFINHSCDPNLAVFPCWIEHLNTALPHLVFFTIRPIKAGEELSFDYIRADNEEVPYENLSTAARVQCRCGAANCRKVLF 633          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV92_XENTR (Histone-lysine N-methyltransferase SUV39H2 OS=Xenopus tropicalis GN=suv39h2 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29
Identity = 68/193 (35.23%), Postives = 102/193 (52.85%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTEN-KGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYELLSGEG-----------------YPCHCGASKCRGRL 530
            N  C C   CPNRV++ G    L +F+T+N +GW V+  Q I + +FV EY+GEV+   E  +R  +Y   G  Y+ ++    ++          + +DA +YGNVS F+NHSC PNL    V ++++D +   I L+++R+I  GEELT+DY    + G G                   C CGA+ CRG L
Sbjct:  226 NSRCKCGPDCPNRVVQKGPPYSLCIFRTDNGRGWGVKTLQKIKKNSFVMEYVGEVITSEEAERRGQQYDSRGITYLFDLDYEADE----------FTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDVRLPRIALFSTRNIKAGEELTFDYQ---MKGSGDFSTDSIDMSPAKKRVRIACKCGAATCRGYL 405          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV91_XENLA (Histone-lysine N-methyltransferase SUV39H1 OS=Xenopus laevis GN=suv39h1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29
Identity = 67/200 (33.50%), Postives = 106/200 (53.00%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKT-ENKGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYEL-------------LSGEGYP----------CHCGASKCRGRLY 533
            N  C C  +CPNRV++ G++ K  +F+T + +GW VR  + I + +FV EY+GE++   E  +R   Y R G  Y+ ++  ++ D+         Y +DA +YGN+S F+NHSC PNL  + V ++++D +   I  +A+R I  GEELT+DY+ ++                 G P          C CG S CR  L+
Sbjct:  232 NSCCRCGPSCPNRVVQKGIQYKFCIFRTSDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGTTYLFDLD-YVEDV---------YTVDAARYGNISHFVNHSCKPNLQVYNVFIDNLDERLPRIAFFATRTIRTGEELTFDYNMQVDPVDVESSKMDSNFGIAGLPASPKKRVRVECKCGVSSCRKYLF 421          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV91_PONAB (Histone-lysine N-methyltransferase SUV39H1 OS=Pongo abelii GN=SUV39H1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTEN-KGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYEL---------------LSG-EGYP-------CHCGASKCRGRLY 533
            N  C C   CPNRV++ G+R  L +F+T++ +GW VR  + I + +FV EY+GE++   E  +R   Y R G  Y+ ++  ++ D+         Y +DA  YGN+S F+NHSC PNL  + V ++++D +   I  +A+R I  GEELT+DY+ ++               L+G  G P       C CG   CR  L+
Sbjct:  223 NSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFDLD-YVEDV---------YTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRKYLF 412          
BLAST of CK938083 vs. ExPASy Swiss-Prot
Match: SUV91_HUMAN (Histone-lysine N-methyltransferase SUV39H1 OS=Homo sapiens GN=SUV39H1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 3
Query:    6 NHMCSCDRTCPNRVLRNGVRVKLEVFKTEN-KGWAVRAGQAILRGTFVCEYIGEVLDELETNKRRSRYGRDGCGYMLNIGAHINDMGRLIEGQVRYVIDATKYGNVSRFINHSCFPNLVNHQVLVESMDYQRAHIGLYASRDIAVGEELTYDYHYEL---------------LSG-EGYP-------CHCGASKCRGRLY 533
            N  C C   CPNRV++ G+R  L +F+T++ +GW VR  + I + +FV EY+GE++   E  +R   Y R G  Y+ ++  ++ D+         Y +DA  YGN+S F+NHSC PNL  + V ++++D +   I  +A+R I  GEELT+DY+ ++               L+G  G P       C CG   CR  L+
Sbjct:  223 NSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFDLD-YVEDV---------YTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRKYLF 412          
The following BLAST results are available for this feature:
BLAST of CK938083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
SUVR5_ARATH5.643e-6364.04Histone-lysine N-methyltransferase SUVR5 OS=Arabid... [more]
EHMT2_MOUSE4.361e-3138.51Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
EHMT2_HUMAN5.696e-3138.51Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
EHMT1_HUMAN5.696e-3140.80Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
SUV39_DROME3.692e-3039.25Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]
SUV39_DROPS4.822e-3038.71Histone-lysine N-methyltransferase Su(var)3-9 OS=D... [more]
SUV92_XENTR2.393e-2935.23Histone-lysine N-methyltransferase SUV39H2 OS=Xeno... [more]
SUV91_XENLA2.393e-2933.50Histone-lysine N-methyltransferase SUV39H1 OS=Xeno... [more]
SUV91_PONAB5.331e-2934.50Histone-lysine N-methyltransferase SUV39H1 OS=Pong... [more]
SUV91_HUMAN5.331e-2934.50Histone-lysine N-methyltransferase SUV39H1 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_C08 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938083 ID=CK938083; Name=CK938083; organism=Citrus sinensis; type=EST; length=827bp
GGGGCAATCACATGTGTAGCTGCGATAGAACCTGTCCAAATAGAGTTTTG
CGGAATGGAGTACGAGTGAAATTAGAAGTCTTTAAAACAGAGAATAAGGG
TTGGGCCGTTAGGGCAGGTCAAGCAATTCTGCGAGGCACATTTGTATGTG
AGTATATAGGGGAGGTTTTAGATGAGCTGGAGACAAATAAGAGGCGTAGC
AGGTATGGTAGAGACGGATGCGGTTATATGTTAAATATTGGTGCCCATAT
CAATGATATGGGCAGATTGATTGAAGGACAGGTCCGGTATGTCATTGACG
CCACTAAGTATGGAAATGTTTCTCGATTCATCAATCATAGCTGCTTTCCG
AATCTTGTGAATCACCAAGTTCTCGTGGAAAGTATGGATTATCAGCGTGC
CCATATTGGTCTCTATGCAAGTCGAGATATAGCTGTGGGTGAAGAACTGA
CGTATGACTATCACTACGAGCTTCTGTCTGGAGAAGGATATCCATGCCAT
TGTGGAGCTTCAAAGTGCAGGGGACGCCTTTACTGAATCTTTAAAGGACA
TGATTGTAGTCTCCCCAGCATGCAGAAGTTTTGTTTTGAACTTTGGCAAA
TAAAAGCTGGTCAAATTGGCCGGTTATCAACTTATTGCCATAGTAGCTGC
TTACAATATGATTGCCAAGCAAGTCTTCTTGCACAGAGGAAAATTCACCA
GCAGTGGCAATGGGTTTTCTGTGCCACCTGATCACGTGGTTTCTTTCCTC
AAGTAGATATGATACCCAAATGCTCTTTTGTGTACTCAGCACTTGGAAGA
AAAGAGGATGCAAACTCGTTATTTATT
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