CK938037

Overview
NameCK938037
Unique NameCK938037
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1862 contig Csv1_Contig1862:148..952. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938037 vs. ExPASy Swiss-Prot
Match: CYBP_MOUSE (Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.697e-24
Identity = 76/223 (34.08%), Postives = 116/223 (52.02%), Query Frame = 1
Query:   46 AEMAEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE--------------EGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 648
            A + E+L  DLEE++ L   + R R+   + SE   +E   K               E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    2 ASVLEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNKMQQKSQKKPELDNEKPAAVVAPLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of CK938037 vs. ExPASy Swiss-Prot
Match: CYBP_RAT (Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 74/218 (33.94%), Postives = 118/218 (54.13%), Query Frame = 1
Query:   46 AEMAEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE-----KLSKEEGPAPV---PTPAKVSSTPALNY-ITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 648
            A   E+L  DLEE++ L   + R R+   + +E   +E     K+ ++    P      PA V +     Y + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GKNY      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    2 ASALEELQKDLEEVKVLLEKSTRKRLRDTLTNEKSKIETELRNKMQQKSQKKPEFDNEKPAAVVAPLTTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKNLNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKPSYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219          
BLAST of CK938037 vs. ExPASy Swiss-Prot
Match: CYBP_BOVIN (Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 74/220 (33.64%), Postives = 117/220 (53.18%), Query Frame = 1
Query:   58 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKG---NWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 648
            E+L  DLEE++ L   A R R+   + +E   +E               +L++ E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K ++    ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    6 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEMKNKMQQKSQRKAELTENEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220          
BLAST of CK938037 vs. ExPASy Swiss-Prot
Match: CYBP_PONAB (Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23
Identity = 72/221 (32.58%), Postives = 114/221 (51.58%), Query Frame = 1
Query:   55 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 648
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K  +    D      + +++K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKEKPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of CK938037 vs. ExPASy Swiss-Prot
Match: CYBP_MACFA (Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.876e-23
Identity = 74/221 (33.48%), Postives = 116/221 (52.49%), Query Frame = 1
Query:   55 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 648
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
BLAST of CK938037 vs. ExPASy Swiss-Prot
Match: CYBP_HUMAN (Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.451e-23
Identity = 74/221 (33.48%), Postives = 116/221 (52.49%), Query Frame = 1
Query:   55 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPVPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA---SKGNWLDLQYKE--DKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 648
            +E+L  DLEE++ L   A R R+   + +E   +E               +L   E PA V  P     T     + + ++ WDQ ++ VKIYI+L GV Q   + ++  F + SFD+   ++ GK+Y      L + I  E S   VK   V+I+  K    ++ ++L    KE  +K KP+ D E DP  G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct:    3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218          
The following BLAST results are available for this feature:
BLAST of CK938037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CYBP_MOUSE1.697e-2434.08Calcyclin-binding protein OS=Mus musculus GN=Cacyb... [more]
CYBP_RAT6.449e-2433.94Calcyclin-binding protein OS=Rattus norvegicus GN=... [more]
CYBP_BOVIN6.449e-2433.64Calcyclin-binding protein OS=Bos taurus GN=CACYBP ... [more]
CYBP_PONAB1.876e-2332.58Calcyclin-binding protein OS=Pongo abelii GN=CACYB... [more]
CYBP_MACFA1.876e-2333.48Calcyclin-binding protein OS=Macaca fascicularis G... [more]
CYBP_HUMAN2.451e-2333.48Calcyclin-binding protein OS=Homo sapiens GN=CACYB... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004478_H12 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938037 ID=CK938037; Name=CK938037; organism=Citrus sinensis; type=EST; length=805bp
GGGGGTCCTTCGACCTTCATCTACTACGCTCTCGTCACTCAGAAGGCAGA
AATGGCGGAGGATTTGGTGCTGGATTTGGAAGAGCTAAGACAACTACGGA
GCATCGCAAAACGACCTCGTATCGTCTCTCTTATTAACTCTGAGATTCAT
ACCTTGGAGAAGTTGTCAAAAGAGGAAGGTCCAGCTCCAGTTCCAACACC
AGCTAAGGTCTCTTCTACTCCAGCACTCAACTATATTACGCTTGGATCAT
TCAGCTGGGATCAGGATAATGAAAAAGTCAAGATATATATTTCTTTAGAG
GGAGTAGTCCAGGATAAAATGGAAGCAGAGTTCAAGCAGTGGTCCTTTGA
TGTCAAATTCCATGATGTCCAAGGGAAGAATTACCGGTTTACTAGCCCAA
GGTTGAACCAGGAGATTGTTCCTGAGAAAAGCAAGGTGCTGGTTAAACCC
ACAAGGGTTGTCATCATGCTCTTTAAAGCTTCAAAGGGAAATTGGTTAGA
CTTACAGTACAAAGAGGATAAGCTGAAGCCAAATCTGGATAAAGAACGAG
ATCCTATGGCTGGAATTATGGATTTGATGAAGAATATGTACGAGGAAGGT
GACGACGAAATGAAGCGAACAATTGCAAAAGCTTGGACAGATGCTAGATC
TGGTAAAACAGCTGATCCTCTGAAGGGATATCCCTAAATAAACTAAAGAT
GTAGTCGGATACTCCCCAAAGATGGTGATGTTCTGTGTATGGTCTTCCCC
TTNNNCTGAAGTTACCATTACTGTCATTTTTNNNGCATTTTGTGTTGCGA
ACTTG
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