CX675366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675366 vs. ExPASy Swiss-Prot
Match: RR17_ARATH (30S ribosomal protein S17, chloroplastic OS=Arabidopsis thaliana GN=RPS17 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.159e-25 Identity = 61/100 (61.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 5 MQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSFIAVAMPPRNASKKAAGESSNAGNNELGIPSESEQ 304 MQGRVVCA+SDKTVAVEVVRL PHP QAHDP+NQF+VGD+V+LEKSRPISKTKSF+A+ + R A K AG G+ LG+P ES+Q Sbjct: 53 MQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVIARAARKAEAG-----GDELLGLPLESQQ 147
BLAST of CX675366 vs. ExPASy Swiss-Prot
Match: RR17_PEA (30S ribosomal protein S17, chloroplastic (Fragment) OS=Pisum sativum GN=RPS17 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.577e-22 Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 2 Query: 5 MQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSFIAVAMPPRNASKKAAGESSNAGNNELGIPSESEQQ 307 M+G+VVCAS +KTVAVEV RL PHP QAHDPEN F+VGD+VQL K+RPISK K+F+AV P R + K AG S ELGIP +S+Q+ Sbjct: 41 MEGKVVCASGNKTVAVEVTRLAPHPKYQKRIRLKKKYQAHDPENDFKVGDIVQLLKTRPISKKKTFLAVPAPSRKSKK--AGSS-----GELGIPLQSQQE 134
BLAST of CX675366 vs. ExPASy Swiss-Prot
Match: RR17_ORYSJ (30S ribosomal protein S17, chloroplastic OS=Oryza sativa subsp. japonica GN=RPS17 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.163e-19 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 KMQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSFIAVAMPPRNASKKA 244 ++ GRVV +DKTV VEVVRL PHP QAHDP+NQF+VGD+V+L +SRPISKTK F+AV +PPR+ +K+ Sbjct: 39 QLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELRRSRPISKTKHFLAVPLPPRDTRRKS 119
BLAST of CX675366 vs. ExPASy Swiss-Prot
Match: RR17_MAIZE (30S ribosomal protein S17, chloroplastic OS=Zea mays GN=RPS17 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.984e-19 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 KMQGRVVCASSDKTVAVEVVRLDPHPXXXXXXXXXXXXQAHDPENQFQVGDLVQLEKSRPISKTKSFIAVAMPPRNASKKA 244 ++ GRVV +DKTV VEVVRL PHP QAHDP+NQF+VGD+V+L+ SRPISKTK F+A+ +PPR+ +K+ Sbjct: 34 QLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAHDPDNQFKVGDVVELQPSRPISKTKHFLAIPLPPRDTRRKS 114 The following BLAST results are available for this feature:
BLAST of CX675366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675366 ID=CX675366; Name=CX675366; organism=Citrus sinensis; type=EST; length=465bpback to top |