CK937722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_CITSI (Cytochrome c biogenesis protein ccsA OS=Citrus sinensis GN=ccsA PE=3 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 5.554e-90 Identity = 171/196 (87.24%), Postives = 171/196 (87.24%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNDYRY 592 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE IHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGY LVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARN YRY Sbjct: 17 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYESLIFLSWSLSIIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYAALLCGSLLSTALLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRY 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_EUCGG (Cytochrome c biogenesis protein ccsA OS=Eucalyptus globulus subsp. globulus GN=ccsA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.130e-57 Identity = 119/197 (60.41%), Postives = 140/197 (71.07%), Query Frame = -1 Query: 8 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYR 592 ++SI ITI+LI+ VDEI GLY SSE+GMTAT FC+TGLL+TRW+YS HFPLSDLYE IH + FK ++N+LS ITAPS FTQGFATSG LT+MHQS I+VPALQ QWLMMHVSMM+LGY LVIT RK IR+F K+ NF +N SF F EIQYMNE+ NV L + S+RN YR Sbjct: 17 IISIVITIFLISLSVDEIVGLYDSSEKGMTATFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWSFSVIHMVPYFKKHKNYLSTITAPSTIFTQGFATSGLLTEMHQSEIVVPALQSQWLMMHVSMMILGYAALLCGSLLSVALLVITLRKAIRVFSKKNNF--LNESFSFVEIQYMNERSNVLLTTSFCSSRNYYR 211
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_VITVI (Cytochrome c biogenesis protein ccsA OS=Vitis vinifera GN=ccsA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.076e-56 Identity = 122/197 (61.93%), Postives = 138/197 (70.05%), Query Frame = -1 Query: 8 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYR 592 VVSI ITI+LIT LVDEI GL SSE+GM AT FC+TGLL+TRW+Y HFPLSDLYE IH + FK ++NHLSA+TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY LVITFR+ IR+ K +F +N SF F EIQYMN+ NV N+ LS RN YR Sbjct: 17 VVSIVITIHLITLLVDEIVGLSDSSEKGMIATFFCITGLLVTRWIYLGHFPLSDLYESLIFLSWSFSIIHIVPYFKKHKNHLSALTAPSAIFTQGFATSGLLTEMHQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRQDIRILCKNNHF--LNKSFSFDEIQYMNKGNNVLQNTSFLSVRNYYR 211
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_MANES (Cytochrome c biogenesis protein ccsA OS=Manihot esculenta GN=ccsA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.169e-55 Identity = 120/198 (60.61%), Postives = 136/198 (68.69%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN--SLSARNDYRY 592 VVSI ITI+LIT L DE LY SSE+GM T FC+TGLL+TRW++ H PLSDLYE IH + FK ++N LSAITAPS FFTQGFATSG LT MHQS ILVPALQ QWLMMHVSMM+LGY LVITFRK+IR+F K N +N SF FSEIQYM E+KNV N LS+RN YR+ Sbjct: 17 VVSIVITIHLITLLADEFVELYDSSEKGMITTFFCITGLLVTRWIFLGHLPLSDLYESLIFLSWSFSIIHMVPYFKKHKNFLSAITAPSTFFTQGFATSGLLTDMHQSEILVPALQSQWLMMHVSMMILGYAALLCGSLFSVAFLVITFRKIIRIFDKSNNL--LNNSFFFSEIQYMAERKNVLRNISFLSSRNYYRF 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_CARPA (Cytochrome c biogenesis protein ccsA OS=Carica papaya GN=ccsA PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.801e-55 Identity = 120/199 (60.30%), Postives = 138/199 (69.35%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 VVSI ITIY +T LVDEI GLY SS++GM T FC+TGLL RW+YS HFPLS+LYE IH + F K ++N+L+AIT PSA TQGFATSG L KM QS ILVPALQ QWLMMHVSMMVLGY LVITFRKVIR+F K NF +N SF F +IQYMNE+ N+ LN+ LS+RN YRY Sbjct: 17 VVSIVITIYFLTLLVDEIVGLYDSSDKGMIVTFFCITGLLAARWIYSGHFPLSNLYESLIFLSWSFSIIHMVCYFNKKHKNNLNAITGPSAILTQGFATSGLLNKMSQSVILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKVIRIFGKSNNF--LNESFSFGKIQYMNERSNILLNTSFLSSRNYYRY 213
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_GOSHI (Cytochrome c biogenesis protein ccsA OS=Gossypium hirsutum GN=ccsA PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.576e-55 Identity = 120/202 (59.41%), Postives = 138/202 (68.32%), Query Frame = -1 Query: 5 VVSIGITIYLITF--LVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 VVSI ITI+ +T LVDE+ GLY SSE+GM T FC+TGLL+TRW+YS HFPLSDLYE IH + FK +N+LSAITAPSA FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGY LVITFRK I++ + NF SF F +IQYMNE+ NV LN+ LS++N YRY Sbjct: 17 VVSIVITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPSAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNF-----SFSFGKIQYMNERSNVLLNTYFLSSKNYYRY 213
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_PLAOC (Cytochrome c biogenesis protein ccsA OS=Platanus occidentalis GN=ccsA PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 9.895e-55 Identity = 118/198 (59.60%), Postives = 138/198 (69.70%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 +VSI ITI+L+T LVD I GLY SSE+GM AT C+TG L+TRW+YSRHFPLSDLYE IH + +N++NHLSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y LVI FRK I +F K N++ + GSF F E QY+NE+ N+ N+ LS RN YRY Sbjct: 17 IVSIVITIHLMTLLVDGIVGLYDSSEKGMIATFLCITGFLVTRWIYSRHFPLSDLYESLIFLSWSFSIIHMVPKIRNHKNHLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYAALLCGSLLSIALLVIRFRKNIEIFGK-DNYLLI-GSFSFGESQYVNERSNILRNTSFLSFRNYYRY 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_GOSBA (Cytochrome c biogenesis protein ccsA OS=Gossypium barbadense GN=ccsA PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.879e-54 Identity = 119/202 (58.91%), Postives = 137/202 (67.82%), Query Frame = -1 Query: 5 VVSIGITIYLITF--LVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKI--FDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 VVSI ITI+ +T LVDE+ GLY SSE+GM T FC+TGLL+TRW+YS HFPLSDLYE IH + FK +N+LSAITAP A FTQGFATSG LTKMHQS IL PALQ QWLMMHVSMMVLGY LVITFRK I++ + NF SF F +IQYMNE+ NV LN+ LS++N YRY Sbjct: 17 VVSIVITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPRAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNF-----SFSFGKIQYMNERSNVLLNTYFLSSKNYYRY 213
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_MORIN (Cytochrome c biogenesis protein ccsA OS=Morus indica GN=ccsA PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 6.414e-54 Identity = 118/198 (59.60%), Postives = 135/198 (68.18%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNDYRY 592 VVSI ITI+LIT LVDEI GLY S E+GM T FC+TGLL+TRW+Y R+ PLS+LYE IH + FK +N+L AITAPSA FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMMVLGY LVITFRK I +F K NF VN SF EIQY+ EK N+ N+ LS+RN YR+ Sbjct: 17 VVSIVITIHLITLLVDEIIGLYDSLEKGMMTTFFCITGLLMTRWIYLRYLPLSNLYESLIFLSWSFSIIHMVPYFKKYKNYLKAITAPSAIFTQGFATSGLLTEMHQSEILVPALQSHWLMMHVSMMVLGYAALLCGSLLSLALLVITFRKFISIFSKSNNF--VNESFSLGEIQYVREKNNLLPNTSFLSSRNYYRF 212
BLAST of CK937722 vs. ExPASy Swiss-Prot
Match: CCSA_BUXMI (Cytochrome c biogenesis protein ccsA OS=Buxus microphylla GN=ccsA PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 6.414e-54 Identity = 119/198 (60.10%), Postives = 135/198 (68.18%), Query Frame = -1 Query: 5 VVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN--SLSARNDYRY 592 +VSI ITI+LIT LVDEI GLY S E+GM +T C+TGLL+TRW+YS H PLS+LYE IH I FKN++NHLS +TAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVL Y LVITFRK I +F KR + + GSF F EIQY NE+ NV N LS RN RY Sbjct: 17 IVSIVITIHLITLLVDEIVGLYDSLEKGMISTFLCITGLLVTRWIYSGHLPLSNLYESLIFLSWSFSIIHMIPYFKNHKNHLSLVTAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMVLSYGALLCGSLLSVALLVITFRKNIDIFGKRNHL--LIGSFSFGEIQYTNERSNVLRNVSFLSLRNYRRY 212 The following BLAST results are available for this feature:
BLAST of CK937722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937722 ID=CK937722; Name=CK937722; organism=Citrus sinensis; type=EST; length=622bpback to top |