CK937718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y4103_VIBPA (UPF0189 protein VPA0103 OS=Vibrio parahaemolyticus GN=VPA0103 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.231e-36 Identity = 82/160 (51.25%), Postives = 108/160 (67.50%), Query Frame = 2 Query: 152 GDISQWFVDGFSDAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDFKEVHFVLFTDDLHNLW 631 GDI+ VD AIVN+AN RMLGGGG DGAI RAAGP L+ AC+ V +V GIRCP G+ARIT L A +VIH VGPIY +P+ L SAY+ SL LA AN+ Q +A PAISCG+Y YP +EAA +A++ + ++ F LF++++ ++W Sbjct: 9 GDITTAHVD----AIVNAANPRMLGGGGVDGAIHRAAGPALINACYAVDDVD-GIRCPFGDARITEAGNLNARYVIHAVGPIYDKFADPKTVLESAYQRSLDLALANHCQSVALPAISCGVYGYPPQEAAEVAMAVCQRPEYAALDMRFYLFSEEMLSIW 163
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y3184_XANCP (UPF0189 protein XCC3184 OS=Xanthomonas campestris pv. campestris GN=XCC3184 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.826e-35 Identity = 83/154 (53.90%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 152 GDISQWFVDGFSDAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY--GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDFK-EVHFVL 604 GDI+Q VD IVN+ANE +LGGGG DGAI RAAGP LLEAC +PEV G+RCPTGE RIT GF L A H+ HTVGP++ G PE L + Y SL LA+ + IAFPAISCG+Y YP +AA IA++ +++ K H VL Sbjct: 8 GDITQLDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPEVRPGVRCPTGEIRITDGFDLKARHIFHTVGPVWRDGKHNEPE-QLANCYWQSLKLAEQMMLHSIAFPAISCGIYGYPLYQAARIAVTETRDWQRSHKVPKHIVL 156
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y3343_XANAC (UPF0189 protein XAC3343 OS=Xanthomonas axonopodis pv. citri GN=XAC3343 PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.354e-34 Identity = 81/154 (52.60%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 152 GDISQWFVDGFSDAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY--GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDFK-EVHFVL 604 GDI++ VD IVN+ANE +LGGGG DGAI RAAGP LLEAC +P+V G+RCPTGE RIT GF L A H+ HTVGP++ G PE L + Y SL LA+ + IAFPAISCG+Y YP +AA IA++ +++ K H VL Sbjct: 8 GDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGVRCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPE-QLANCYWQSLKLAEQMMLHSIAFPAISCGIYGYPLHQAARIAVTETRDWQRSHKVPKHIVL 156
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y334_RALSO (UPF0189 protein RSc0334 OS=Ralstonia solanacearum GN=RSc0334 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33 Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 2 Query: 188 DAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASLRSA-YKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDFKEVHFVLFT 610 DAIVN+AN +LGGGG DGAI RAAGPELLEAC + C TG+A+ITPGF LPA ++IHTVGPI+ EA+L +A Y+NSL+LAK ++++ IAFP IS G+Y +P + AA IA+ TV+E D ++ F F+ Sbjct: 21 DAIVNAANSALLGGGGVDGAIHRAAGPELLEACRALH------GCRTGQAKITPGFLLPARYIIHTVGPIWRGGRQDEAALLAACYRNSLALAKQHDVRTIAFPCISTGVYGFPPQLAAPIAVRTVREHGADLDDIVFCCFS 156
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y2219_CHLTE (UPF0189 protein CT2219 OS=Chlorobium tepidum GN=CT2219 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.403e-32 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 2 Query: 188 DAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASL-RSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDFKEVHFVLF 607 DAIVN+AN +LGGGG DGAI RAAGP+LLEAC E+G C TGEA+IT G++LPA+ VIHTVGP++ + EA L S Y+NSL LA ++ + IAFP+IS G+Y YP E+AA IAI+TV+E D + + V+F Sbjct: 20 DAIVNAANTSLLGGGGVDGAIHRAAGPKLLEACR---ELG---GCLTGEAKITKGYRLPATFVIHTVGPVWHGGNHGEAELLASCYRNSLKLAIEHHCRTIAFPSISTGIYGYPVEQAAAIAITTVREMLADERGIEKVIF 154
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: MACD2_XENLA (MACRO domain-containing protein 2 OS=Xenopus laevis GN=macrod2 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.139e-32 Identity = 83/172 (48.26%), Postives = 111/172 (64.53%), Query Frame = 2 Query: 152 GDISQWFVDGFSDAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYG--VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDFKE----VHFVLFTDDLHNLWLKKANE 649 GDI+Q VD AIVN+AN +LGGGG DG I RA+GP LL C E+G C TG+A+IT G++LPA +VIHTVGPI +T N + L S Y +SL+LA N+I+ IAFP IS G+Y YP+E AA +A++TVKEF ++ V F +F + ++ +K NE Sbjct: 75 GDITQLEVD----AIVNAANTSLLGGGGVDGCIHRASGPSLLAECR---ELG---GCETGQAKITCGYELPAKYVIHTVGPIARGHITPNHKQDLASCYNSSLTLATENDIRTIAFPCISTGIYGYPNEPAANVALTTVKEFLKKNRDKIDRVIFCVFLEVDFKIYKRKLNE 236
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y1614_METAC (UPF0189 protein MA_1614 OS=Methanosarcina acetivorans GN=MA_1614 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.920e-31 Identity = 75/142 (52.82%), Postives = 94/142 (66.20%), Query Frame = 2 Query: 188 DAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGV-TINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF--ANDFKEVHFVL 604 DAIVN+AN +LGGGG DGAI RAAGP LLE C + CPTGEA+IT G+ LPA +VIHTVGPI+ T + L S Y+ SL LA+ +++ IAFP IS G Y +P E AA IA+S VKEF N+ E+ F++ Sbjct: 42 DAIVNAANNTLLGGGGVDGAIHRAAGPGLLEECRTLN------GCPTGEAKITKGYLLPAKYVIHTVGPIWQEGTKGEDEFLASCYRKSLELARKYDVKTIAFPTISTGAYGFPSERAARIAVSQVKEFLKVNELPEIVFLV 177
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: YMDB_SALTY (UPF0189 protein ymdB OS=Salmonella typhimurium GN=ymdB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.010e-30 Identity = 78/166 (46.99%), Postives = 106/166 (63.86%), Query Frame = 2 Query: 152 GDISQWFVDGFSDAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASL-RSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDF---KEVHFVLFTDDLHNLWLK 637 GDI+Q VD AIVN+AN ++GGGG DGAI RAAGP LL+AC + + C TG A ITP KL A VIHTVGP++ + EA L AY+N L LA+AN+ + IAFPAIS G+Y YP +AA +A+ TV +F + ++V+FV + ++ L+ + Sbjct: 10 GDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG--ECQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAISTGVYGYPRAQAAEVAVRTVSDFITRYALPEQVYFVCYDEETARLYAR 169
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: YMDB_SALTI (UPF0189 protein ymdB OS=Salmonella typhi GN=ymdB PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.010e-30 Identity = 78/166 (46.99%), Postives = 106/166 (63.86%), Query Frame = 2 Query: 152 GDISQWFVDGFSDAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASL-RSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDF---KEVHFVLFTDDLHNLWLK 637 GDI+Q VD AIVN+AN ++GGGG DGAI RAAGP LL+AC + + C TG A ITP KL A VIHTVGP++ + EA L AY+N L LA+AN+ + IAFPAIS G+Y YP +AA +A+ TV +F + ++V+FV + ++ L+ + Sbjct: 10 GDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG--ECQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAISTGVYGYPRAQAAEVAVRTVSDFITRYALPEQVYFVCYDEETARLYAR 169
BLAST of CK937718 vs. ExPASy Swiss-Prot
Match: Y177_METMA (UPF0189 protein MM_0177 OS=Methanosarcina mazei GN=MM_0177 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30 Identity = 77/147 (52.38%), Postives = 95/147 (64.63%), Query Frame = 2 Query: 188 DAIVNSANERMLGGGGCDGAIRRAAGPELLEACHRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF--ANDFKE-VHFVLFTDD 616 DAIVN+AN +LGGGG DGAI RAAGP LLE C + CPTGEA+IT G+ LPA ++IHTVGP++ G + L S Y+ SL LA+ I+ IAFPAIS G Y +P E AA IA+S VKEF N+ E V+ V + D Sbjct: 34 DAIVNAANNTLLGGGGVDGAIHRAAGPALLEECKTLN------GCPTGEAKITSGYLLPAKYIIHTVGPVWQGGEKGEDELLASCYRKSLELARDYKIKTIAFPAISTGAYGFPSERAAGIAVSQVKEFLQKNEIPETVYLVCYNKD 174 The following BLAST results are available for this feature:
BLAST of CK937718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937718 ID=CK937718; Name=CK937718; organism=Citrus sinensis; type=EST; length=852bpback to top |