CX675348

Overview
NameCX675348
Unique NameCX675348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG1_PIG (5'-AMP-activated protein kinase subunit gamma-1 OS=Sus scrofa GN=PRKAG1 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 3 
Query:  306 SSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            +SF+ +H  Y+L+P S K+   D +L VK+AF  L   G+   PLWD  K  FVG+L+  DFI IL       + +   ELE H I  W+   LQ + K            PLV   P  SL +    +++NK+  +P+I
Sbjct:   30 TSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY-YKSALVQIYELEEHKIETWREVYLQDSFK------------PLVCISPNASLFDAVSSLIRNKIHRLPVI 156
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG1_MOUSE (5'-AMP-activated protein kinase subunit gamma-1 OS=Mus musculus GN=Prkag1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 3 
Query:  306 SSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            +SF+ +H  Y+L+P S K+   D +L VK+AF  L   G+   PLWD  K  FVG+L+  DFI IL       + +   ELE H I  W+   LQ + K            PLV   P  SL +    +++NK+  +P+I
Sbjct:   29 TSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY-YKSALVQIYELEEHKIETWREVYLQDSFK------------PLVCISPNASLFDAVSSLIRNKIHRLPVI 155
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG1_HUMAN (5'-AMP-activated protein kinase subunit gamma-1 OS=Homo sapiens GN=PRKAG1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 3 
Query:  306 SSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            +SF+ +H  Y+L+P S K+   D +L VK+AF  L   G+   PLWD  K  FVG+L+  DFI IL       + +   ELE H I  W+   LQ + K            PLV   P  SL +    +++NK+  +P+I
Sbjct:   30 TSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY-YKSALVQIYELEEHKIETWREVYLQDSFK------------PLVCISPNASLFDAVSSLIRNKIHRLPVI 156
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG1_BOVIN (5'-AMP-activated protein kinase subunit gamma-1 OS=Bos taurus GN=PRKAG1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.019e-15
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 3 
Query:  306 SSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            +SF+ +H  Y+L+P S K+   D +L VK+AF  L   G+   PLWD  K  FVG+L+  DFI IL       + +   ELE H I  W+   LQ + K            PLV   P  SL +    +++NK+  +P+I
Sbjct:   30 TSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY-YKSALVQIYELEEHKIETWREVYLQDSFK------------PLVCISPNASLFDAVSSLIRNKIHRLPVI 156
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG1_RAT (5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus norvegicus GN=Prkag1 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 49/154 (31.82%), Postives = 77/154 (50.00%), Query Frame = 3 
Query:  264 QYSEADLQLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            ++S+   + +    ++F+ +H  Y+L+P S K+   D +L VK+AF  L   G+   PLWD  K  FVG+L+  DFI IL       + +   ELE H I  W+   LQ + K            PLV   P  SL +    +++NK+  +P+I
Sbjct:   15 EHSQETPESNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRY-YKSALVQIYELEEHKIETWREVYLQDSFK------------PLVCISPNASLFDAVSSLIRNKIHRLPVI 155
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG3_PIG (5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa GN=PRKAG3 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 3 
Query:  312 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            F+  HT Y+ +  S K+   D  L +K+AF  L   G+   PLWD  K  FVG+L+  DFIL+L         +   E+E H I  W+   LQ             C +PLV   P DSL E    +++N++  +P++
Sbjct:  212 FMQEHTCYDAMATSSKLVIFDTMLEIKKAFFALVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRY-YRSPLVQIYEIEEHKIETWREIYLQ------------GCFKPLVSISPNDSLFEAVYALIKNRIHRLPVL 336
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG3_MOUSE (5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus GN=Prkag3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 44/138 (31.88%), Postives = 67/138 (48.55%), Query Frame = 3 
Query:  312 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            F+  HT Y+ +  S K+   D  L +K+AF  +   G+   PLWD  K  FVG+L+  DFIL+L         +   E+E H I  W+   LQ             C +PLV   P DSL E    +++N++  +P++
Sbjct:  187 FMQEHTCYDAMATSSKLVIFDTTLEIKKAFFAMVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRY-YRSPLVQIYEIEEHKIETWREIYLQ------------GCFKPLVSISPNDSLFEAVYALIKNRIHRLPVL 311
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG3_HUMAN (5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens GN=PRKAG3 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 3 
Query:  312 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            F+  HT Y+ +  S K+   D  L +K+AF  L   G+   PLWD  K  FVG+L+  DFIL+L         +   E+E H I  W+   LQ             C +PLV   P DSL E    +++N++  +P++
Sbjct:  187 FMQEHTCYDAMATSSKLVIFDTMLEIKKAFFALVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRY-YRSPLVQIYEIEQHKIETWREIYLQ------------GCFKPLVSISPNDSLFEAVYTLIKNRIHRLPVL 311
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG3_BOVIN (5'-AMP-activated protein kinase subunit gamma-3 OS=Bos taurus GN=PRKAG3 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 3 
Query:  312 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            F+  HT Y+ +  S K+   D  L +K+AF  L   G+   PLWD  K  FVG+L+  DFIL+L         +   E+E H I  W+   LQ             C +PLV   P DSL E    +++N++  +P++
Sbjct:  194 FMQEHTCYDAMATSSKLVIFDTMLQIKKAFFALVANGVRAAPLWDSKKQSFVGMLTITDFILVLHRY-YRSPLVQIYEIEEHKIETWREIYLQ------------GCFKPLVSISPSDSLFEAVYTLIKNRIHRLPVL 318
[Close]
BLAST of CX675348 vs. ExPASy Swiss-Prot
Match: AAKG2_PONAB (5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii GN=PRKAG2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14
Identity = 46/138 (33.33%), Postives = 66/138 (47.83%), Query Frame = 3 
Query:  312 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLXEVALKILQNKVATVPII 725
            F+ +H  Y+++P S K+   D  L VK+AF  L   G+   PLW+  K  FVG+L+  DFI IL         +   ELE H I  W+   LQ   K            PLV   P  SL +    +++NK+  +P+I
Sbjct:  219 FMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRY-YKSPMVQIYELEEHKIETWRELYLQETFK------------PLVNISPDASLLDAVYSLIKNKIHRLPVI 343
The following BLAST results are available for this feature:
BLAST of CX675348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
AAKG1_PIG3.019e-1535.005'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_MOUSE3.019e-1535.005'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_HUMAN3.019e-1535.005'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_BOVIN3.019e-1535.005'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG1_RAT5.150e-1531.825'-AMP-activated protein kinase subunit gamma-1 OS... [more]
AAKG3_PIG1.498e-1432.615'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG3_MOUSE1.498e-1431.885'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG3_HUMAN1.498e-1432.615'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG3_BOVIN1.498e-1432.615'-AMP-activated protein kinase subunit gamma-3 OS... [more]
AAKG2_PONAB9.712e-1433.335'-AMP-activated protein kinase subunit gamma-2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61F05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61F05-L9-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675348 ID=CX675348; Name=CX675348; organism=Citrus sinensis; type=EST; length=779bp
TGCCTATGTCCCCATCTGAAGGATGTCCTGCTGTTTTTCAAATCATTTGC
AGGTTGCCACCTGGGCATCACCAGTACAAGTTCTATGTTGATGGAGAATG
GCGGCATGATGAGAACCAGCCCCATGTGAGCGGGAATTATGGTGTAGTGA
ATTGTGTATATATAGCTGTGCCACAACCAGATATGGTTCCTAACACCATC
AGCCCTGAGACTTCTGGTAACATGGAGGTAGATGATGTTGTTATGCGTCC
GGAAGGTTTTGCACAATACTCAGAGGCTGATTTACAGCTTTCTCGTGATC
GTATATCTTCATTCTTGTCCACACATACNGTATACGAGCTCCTTCCTGAC
TCAGGCAAGGTCACTGCCTTGGATGTCAATTTAGCTGTGAAGCAAGCATT
TCATGTTCTCTATGAGCAGGGACTTCCGATGGTCCCTCTTTGGGATGACT
TCAAGGGCCGTTTTGTTGGGGTTCTTAGTGCATTGGACTTCATCCTGATT
CTGAGAGAGTTGGGGACTAATGGATCAAATTTAACGGAGGAAGAATTAGA
GACGCATACCATATCAGCTTGGAAAGTTGGGAAATTACAGCTTAATCTCA
AACGACAAATGGATGGCAATGGGAGACCATGTCCTAGACCTCTAGTGCAA
GCTGGCCCATATGATTCTCTCANAGAAGTTGCTTTGAAAATTTTGCAAAA
TAAGGTGGCTACTGTTCCCATTATCCATTCAACGGGACCGGCTGGTCATG
TCAGGAGATACTATATCTCGCTTCTCTGT
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