CX675346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675346 vs. ExPASy Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.158e-24 Identity = 61/160 (38.12%), Postives = 98/160 (61.25%), Query Frame = -3 Query: 279 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVK 755 VVGFD+EW P + +G L K A++Q+C + CY+ + + P L++LLE+ + K GVGI D K+ RD+++ +K +L+ +A K+ ++ W L SL + L+ K+L K IR NW L++DQ LYAATDA+A + +Y+ L+ L + V+ Sbjct: 78 VVGFDMEWPPLYNRGKLG-KVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKC-TETWSLNSLVKHLLGKQLLKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNLEILDDTVQ 235
BLAST of CX675346 vs. ExPASy Swiss-Prot
Match: WRN_MOUSE (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus GN=Wrn PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.819e-24 Identity = 63/160 (39.38%), Postives = 97/160 (60.62%), Query Frame = -3 Query: 279 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIHSGI-PPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVK 755 VVGFD+EW P ++ G R AV+Q+C N CY+ I + P L++LLE+ +I K GVGI D K+ RD++V +++ +L+ +A K+ ++ W L L + ++ K+L K IR NW L++DQ LYAATDA+A +YQ L +L + V+ Sbjct: 72 VVGFDMEWPPIYKPGKRSR-VAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKLKC-AETWSLNGLVKHVLGKQLLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDTVQ 229
BLAST of CX675346 vs. ExPASy Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 66/178 (37.08%), Postives = 99/178 (55.62%), Query Frame = -3 Query: 225 VVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHCYVMQIIH-SGIPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLPEPVKDATDQGNQRCSRLDLHNC 755 V+GFDIEW P + KG K A++Q+C CY+ I +G P L+ LLED ++ KVGVGI D K+ DY + +K +LS +A K+ +KW L + L ++L K R NW+ +L++DQ LYAATDA+A +Y+ L+ + DA + + R R + +C Sbjct: 72 VLGFDIEWPPVYTKGKTG-KVALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVGVGIEGDQWKLMSDYELKLKGFIELSEMANQKLRC-KEKWTFNGLIKHLFKEQLYKRKSYRCSNWDIFLLTEDQKLYAATDAYAGLLIYKKLEGM-----DAHESDSFRVGREGVADC 242
BLAST of CX675346 vs. ExPASy Swiss-Prot
Match: EXD2_HUMAN (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens GN=EXD2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12 Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = -3 Query: 291 IPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLA-KHKIGGDSQKWGLASLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLP 629 +P +L +L D TILKVGVG DA K+ +DY + V+ DL YLA + + L SL E ++ L K +R NW+A+ L++DQ++YAA DA S L+ L P Sbjct: 23 LPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLLGYP 136
BLAST of CX675346 vs. ExPASy Swiss-Prot
Match: EXD2_MOUSE (Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus GN=Exd2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = -3 Query: 240 QIIHSG--IPPSLQLLLEDSTILKVGVGIGSDAGKVYRDYNVSVKASEDLSYLAKHKIGGDSQKWGLA--SLTEMLVCKELKKPNRIRLGNWEADVLSKDQLLYAATDAFASWHLYQVLKSLP----EPVKDATDQGN-----QRCSRL 647 ++I+ G +P +L +L D ILKVGVG DA K+ +DY + V+ DL YLA K G + GL+ SL E ++ L K +R NW+A+ L++DQ+ YAA DA S L+ L P +++TDQ N +RC + Sbjct: 15 RLIYGGRTLPRTLLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAM-KQGNNILCNGLSLKSLAETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRDSYEEESTDQINWQKALERCRNM 162 The following BLAST results are available for this feature:
BLAST of CX675346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675346 ID=CX675346; Name=CX675346; organism=Citrus sinensis; type=EST; length=796bpback to top |