CK937603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX4_ARATH (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.381e-53 Identity = 112/179 (62.57%), Postives = 133/179 (74.30%), Query Frame = 3 Query: 21 MKVHQLARGF---WEHAEP--SLTLGCKRLRPLAPKL------PNAESTSVSS--FDLKSLIRPE-SGPRKLVSSDEKRNPP-QVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHCPRTPAATASFTTTISL 512 MKVH+ + GF W+ + SL+L CKRLRPLAPKL P + S+ V+S FDLK+ IRP+ +GP K + KR+PP Q+ETHPGGTRWNPTQEQIGILEMLY+GGMRTPNAQQIE IT QLGKYGKIEGKNVFYWFQNHKARERQKQKRN+L C + T F ++++ Sbjct: 1 MKVHEFSNGFSSSWDQHDSTSSLSLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQTGPTKF---EHKRDPPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTM 176
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX4_ORYSJ (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 60 AEPSLTLGCKRLRPLAPKLPNAESTSVSSFDLKSLIRPESGPRKLVSSDEKRNPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSL 449 A P+ + C LRPLAPK+ E K + P+ + ++ + N G TRWNP+ EQI +LEMLYRGGMRTPN+ QIE+IT +LGKYG+IEGKNVFYWFQNHKARERQKQKR +L Sbjct: 37 AFPAFSFKC--LRPLAPKISLPEPR-------KMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL 157
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX4_ORYSI (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29 Identity = 70/130 (53.85%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 60 AEPSLTLGCKRLRPLAPKLPNAESTSVSSFDLKSLIRPESGPRKLVSSDEKRNPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSL 449 A P+ + C LRPLAPK+ E K + P+ + ++ + N G TRWNP+ EQI +LEMLYRGGMRTPN+ QIE+IT +LGKYG+IEGKNVFYWFQNHKARERQKQKR +L Sbjct: 37 AFPAFSFKC--LRPLAPKISLPEPR-------KMIAPPDFVVPRARNASKLLNYTVQVPAAGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL 157
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26 Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 3 Query: 81 GCKRLRPLAPKLPNAESTSVSS-----FDLKSL-IRPESGPRKLVS-SDEKRNPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHCPRTPAATASFTTTISLD 515 G ++LRPL P+L + + +V++ F++ + + E R+L+ + E ++PP + + +RWNPT +Q+ +LE LYR G RTP+A I+QITAQL +YGKIEGKNVFYWFQNHKARERQK++R + H T +TAS + D Sbjct: 16 GGRKLRPLIPRLTSCPTAAVNTNSDHRFNMAVVTMTAEQNKRELMMLNSEPQHPPVMVS----SRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRR-QMETGH-EETVLSTASLVSNHGFD 161
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX2_ORYSJ (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica GN=WOX2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22 Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 3 Query: 249 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSH 461 TRW PT EQ+ +LE +YRGG+RTPNA QI+QITA L YG+IEGKNVFYWFQNHKAR+RQK +R L +SH Sbjct: 26 TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQKLRRR-LCISH 95
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX2_ORYSI (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica GN=WOX2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.293e-22 Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 3 Query: 249 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSH 461 TRW PT EQ+ +LE +YRGG+RTPNA QI+QITA L YG+IEGKNVFYWFQNHKAR+RQK +R L +SH Sbjct: 26 TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQKLRRR-LCISH 95
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSJ (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.880e-22 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 252 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNS 446 RW PT+EQI +LE LYR G+RTP A+QI+QITA+L ++G IEGKNVFYWFQNHKAR+RQKQK+ S Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQS 108
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX5_ORYSI (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.880e-22 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 252 RWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNS 446 RW PT+EQI +LE LYR G+RTP A+QI+QITA+L ++G IEGKNVFYWFQNHKAR+RQKQK+ S Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQS 108
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX6_ARATH (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.761e-22 Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 138 VSSFDLKSLIRPESGPRKLVSSDEKRNPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLG 452 ++ D LI SG + + K N P T RWNPT EQI LE LYR G RTP +QI+QI ++L KYG+IEGKNVFYWFQNHKARER K++R G Sbjct: 29 INGNDHHQLITASSGEHDI--DERKNNIPAAAT----LRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRREGG 127
BLAST of CK937603 vs. ExPASy Swiss-Prot
Match: WOX2_ARATH (WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 3 Query: 249 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSL 449 +RWNPT++QI +LE LY+ G+RTP+A QI+QIT +L YG IEGKNVFYWFQNHKAR+RQKQK+ + Sbjct: 13 SRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQERM 79 The following BLAST results are available for this feature:
BLAST of CK937603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937603 ID=CK937603; Name=CK937603; organism=Citrus sinensis; type=EST; length=716bpback to top |