EY665884

BLAST of EY665884 vs. ExPASy Swiss-Prot
Match: RPOT2_NICSY (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris GN=RPOT2 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.583e-23
Identity = 73/193 (37.82%), Postives = 102/193 (52.85%), Query Frame = 1

Query:  109 MSNNKTPIFFSA--NKFDHLPVCXXXXXXXXXXKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPF----SRAYSFLGISQDSILRDKVKFVCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFWCPRGYATVAE--AVSSTDVEEDVSIVEKIQELLQEMKKEKTKRRGKWEGKKQAKSCKGNG 663
            MS+ KTPI  +   N+F                KPT    +P   S +MWRN+ KQ  S   +K      +R YSFLG  QDSI +D  KF  L  +      +G   +GE L  ++++ R       N+NF C + YA+VAE  AVSSTD EEDVS+V+++ ELL E+KKE+ K++  +  +KQ     G G
Sbjct:    1 MSSTKTPISLTIKLNQFTD--------------KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNRTYSFLGFGQDSIFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEE-KKQFAFRRRKQRMLTSGMG 178          

HSP 2 Score: 25.409 bits (54), Expect = 2.583e-23
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  687 RRRKWKIEPEAWEKATNGVK 746
            +RR+ K+E EAWE+A    K
Sbjct:  186 KRRQVKVETEAWEQAAKEYK 205          

HSP 3 Score: 21.9422 bits (45), Expect = 2.583e-23
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  656 GMGTGKYRMLKKKEVE 703
            GMG  KY+ LK+++V+
Sbjct:  176 GMGHRKYQTLKRRQVK 191          

BLAST of EY665884 vs. ExPASy Swiss-Prot
Match: RPO2B_TOBAC (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum GN=RPOT2-TOM PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.770e-21
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 1

Query:  238 SSVMWRNVAKQAISLHLKKPF----SRAYSFLGISQDSILRDKVKFVCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDN-FWCPRGYATVAEAV--SSTDVEEDVSIVEKIQELLQEMKKEKTKRRGKWEGKKQAKSCKGNG 663
            S +MWRN+ KQ  S   +K      +R YSFLG  QDS+ +D  KF  L  +      +G   +GE L  ++++ R       N N F C + YA+VAEAV  SSTD EEDVS+V+++QELL E+KKE+ K++  +  +KQ     G G
Sbjct:   32 SPIMWRNIIKQLSSRTPQKLLFSSKNRTYSFLGFGQDSVFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLLKNQVNSNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEE-KKQFAFRRRKQRMLTSGMG 179          

HSP 2 Score: 25.409 bits (54), Expect = 2.770e-21
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3

Query:  687 RRRKWKIEPEAWEKATNGVK 746
            +RR+ K+E EAWE+A    K
Sbjct:  187 KRRQVKVETEAWEQAAKEYK 206          

HSP 3 Score: 21.9422 bits (45), Expect = 2.770e-21
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 2

Query:  656 GMGTGKYRMLKKKEVE 703
            GMG  KY+ LK+++V+
Sbjct:  177 GMGHRKYQTLKRRQVK 192          

BLAST of EY665884 vs. ExPASy Swiss-Prot
Match: RPOT2_ARATH (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=RPOT2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 4.120e-11
Identity = 64/185 (34.59%), Postives = 86/185 (46.49%), Query Frame = 1

Query:  109 MSNNKTPIFFS--ANKFDHLPVCXXXXXXXXXXKPTIRFPSPEKISSVMWRNVAKQAISLHLKK--PFSRAYSFLGISQDSILRDKVKFVCLDMVPRGIHEVGSGRIGEILNHEDY--MGRTSFGVLKNDNFWCPRGYATVA-EAVSSTDVEEDVSIVEKIQELLQEMKKEKTKRRGK-WEGKKQ 639
            MS+ +TP+F +     FDHL             KP I  P+P   S  MWRN+AKQAIS    +    S+    L  S +SI    + F    ++    H  G   +  I   E++    R   G L        RGY +VA E V STDVEE+     ++ ELL+EMKKEK +   + W  KKQ
Sbjct:    1 MSSAQTPLFLANQTKVFDHL---------IPLHKPFISSPNPVSQSFPMWRNIAKQAISRSAARLNVSSQTRGLLVSSPESIFSKNLSF-RFPVLGSPCHGKGFRCLSGITRREEFSKSERCLSGTL-------ARGYTSVAEEEVLSTDVEEE----PEVDELLKEMKKEKKRESHRSWRMKKQ 164          

HSP 2 Score: 23.483 bits (49), Expect = 4.120e-11
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3

Query:  651 QGEWGLGNIEC*R--RRKWKIEPEAWEKA 731
            Q ++G+G  +     RR+ KIE E WE+A
Sbjct:  164 QDQFGMGRTKFQNLWRRQVKIETEEWERA 192