CK937533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 2.644e-39 Identity = 80/87 (91.95%), Postives = 82/87 (94.25%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VLLDVKPWDDETDMKKLEEAVR VQMEGL W ASKL PVGYGIKKLQIMLTIVDDLVSVD+LIEEHL EEPINE+VQSCDIVAFNKI Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.228e-36 Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VL+D+KPWDDETDMKKLEEAVR +QMEGL W ASKL PVGYGIKKL IM TIVDDLVS+DT+IEE L EPINEYVQSCDIVAFNKI Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.604e-36 Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VL+D+KPWDDETDMKKLEEAV+ +QMEGL W ASKL PVGYGIKKLQI+ TIVDDLVS+DT+IEE L EPINEYVQSCDIVAFNKI Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 4.666e-36 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VLLDVKPWDDETDM KLEEAVR V+MEGLLW ASKL PVGYGIKKLQIM+TIVDDLVSVD+LIE++ EP NEY+QSCDIVAFNKI Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 1.358e-35 Identity = 72/87 (82.76%), Postives = 79/87 (90.80%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VLLDVKPWDDETDM KLEEAVR V+MEGLLW ASKL PVGYGIKKLQIM+TIVDDLVSVD+LIE++ EP NE++QSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 226
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35 Identity = 71/87 (81.61%), Postives = 78/87 (89.66%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VLLDVKPWDDETDM KLEEAVR ++M+GLLW ASKL VGYGIKKLQIMLTIVDDLVSVD L+E++L EP NEY+QSCDIVAFNKI Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 8.801e-35 Identity = 74/87 (85.06%), Postives = 77/87 (88.51%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VLLDVKPWDDETDMKKLEEAVR VQ EGL ASKL PVGYGIKKL IM+TIVDDLVSVD LIE++L EPINEYVQSCDIVAFNKI Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.501e-34 Identity = 72/87 (82.76%), Postives = 76/87 (87.36%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VLL+VKPWDDETDMKKLEEAVR VQM GL W ASKL PVGYGIKKL IM+TIVDDLVSVD LIE+HL EP NEY+QS DIVAFNKI Sbjct: 142 VLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.961e-34 Identity = 71/87 (81.61%), Postives = 75/87 (86.21%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VL+DVKPWDDETDMKKLEEAVRGV+M GL W ASKL PVGYGIKKL IM TIVDDLVS D LIE+ L EP NEY+QSCDIVAFNKI Sbjct: 138 VLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224
BLAST of CK937533 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 9.730e-34 Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 2 Query: 83 VLLDVKPWDDETDMKKLEEAVRGVQMEGLLWRASKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPINEYVQSCDIVAFNKI 343 VL+D+KPWDDETDMKKLEEAVR VQMEGL W ASKL PVGYGIKKLQIMLTI+DDL S T IEE L E PINEYVQSCDIVAFNKI Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDLAS--TPIEEVLCEAPINEYVQSCDIVAFNKI 216 The following BLAST results are available for this feature:
BLAST of CK937533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937533 ID=CK937533; Name=CK937533; organism=Citrus sinensis; type=EST; length=626bpback to top |