CX675327

Overview
NameCX675327
Unique NameCX675327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8360 contig Csv1_Contig8360:57..979. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 370.163 bits (949), Expect = 9.484e-102
Identity = 177/257 (68.87%), Postives = 212/257 (82.49%), Query Frame = 1
Query:  121 SNLRRRSPDDGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSKIFLVGHSQGTIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLALGMHQLNFRSNVLIDLIDSLCNGHLDCNDLLTAITGKNCCFNNSRVDFYLEMD 891
            S+L   SP     SLC+ LI P  Y CTEH++QTKDGY+LALQRV+S     R+Q GPPVLL HGLFM GD WFL+S +ESLGFILAD+GFDVWV NVRGT +S+GHVTLS+  K FWDWSWQDLA+YDLAEMI ++   ++SKIFLVGHSQGTI+S AALTQP V EMVEAAALL PISYLDH+TAPLV RMV MHLDQMV+ALG+HQ+NFRS++L+ L+DSLC GH+DC D LT+ITG NCCFN S++++YL+ +
Sbjct:   21 SHLLHGSP---VNSLCADLIHPANYSCTEHSIQTKDGYILALQRVASLGP--RLQSGPPVLLQHGLFMAGDVWFLNSPKESLGFILADHGFDVWVGNVRGTRYSYGHVTLSDTDKEFWDWSWQDLAMYDLAEMIQYLYSISNSKIFLVGHSQGTIMSFAALTQPHVAEMVEAAALLCPISYLDHVTAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLCEGHMDCTDFLTSITGTNCCFNASKIEYYLDYE 272          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.437e-49
Identity = 106/285 (37.19%), Postives = 161/285 (56.49%), Query Frame = 1
Query:   43 SLSSSLVVGAIFALLLREISAIKTDVSNLRRRSPD-DGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRV-SSRNGNLRVQCGP--PVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSKIFLVGHSQGTIVSLAALTQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLALGMHQLNFRSNVLIDLIDSLC-NGHLDCNDLLTAITGKNCCFNNSRVDFYL 882
            S+  +L V   FAL L+ + A  T    L  + P       +C+  +   GY C EH V T+DGY+L +QR+   R G +    G   PVL+ HG+ + G +W L+  +++L  ILAD GFDVW+ N RGT +S  H  L+   + FW+W+W +L  YDL  M   I+  T  KI  +GHS GT++  A+ ++  +V+ V +AA+LSP++YL H+T  +        L +    LG  + N +S ++ D I ++C    +DC DL++ ITGKNCC N S +D +L
Sbjct:   11 SIGLALSVLIFFALSLKTLEARGT-FGRLAGQPPQRTAAGGICASSVHIFGYKCEEHDVVTQDGYILNMQRIPEGRAGAVAGDGGKRQPVLIQHGILVDGMSWLLNPADQNLPLILADQGFDVWMGNTRGTRFSRRHKYLNPSQRAFWNWTWDELVSYDLPAMFDHIHGLTGQKIHYLGHSLGTLIGFASFSEKGLVDQVRSAAMLSPVAYLSHMTTVIGDIAAKTFLAEATSILGWPEFNPKSGLVGDFIKAICLKAGIDCYDLVSVITGKNCCLNASTIDLFL 294          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIPM_HUMAN (Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.305e-31
Identity = 87/245 (35.51%), Postives = 131/245 (53.47%), Query Frame = 1
Query:  169 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGN-LRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQGTIVSLAAL-TQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLAL-GMHQLNFRSNVLIDLIDSLCNGHL---DCNDLLTAITGKNC-CFNNSRVDFY 879
            S +I+  GYPC E+ V T+DGY+L++ R+        +    P VLL HGL  G   W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A +DL  +I FI  KT   KI+ VG+SQGT +   A  T P++ + ++    L+PI+ + H  +P  + ++    D M+  L G  +  +++  L  L+  LC   +    C++++  + G N    N SR   Y
Sbjct:   50 SEIIQHQGYPCEEYEVATEDGYILSVNRIPRGLVQPKKTGSRPVVLLQHGLVGGASNWISNLPNNSLGFILADAGFDVWMGNSRGNAWSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQEKIYYVGYSQGTTMGFIAFSTMPELAQKIKMYFALAPIATVKHAKSPGTKFLLLP--DMMIKGLFGKKEFLYQTRFLRQLVIYLCGQVILDQICSNIMLLLGGFNTNNMNMSRASVY 292          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIPM_MOUSE (Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.265e-29
Identity = 82/246 (33.33%), Postives = 131/246 (53.25%), Query Frame = 1
Query:  169 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVLLV-HGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQGTIVSLAAL-TQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLAL-GMHQLNFRSNVLIDLIDSLCNGHL---DCNDLLTAITGKNC-CFNNSRVDFYL 882
            S +I+  GYP  E+ V T+DGY+L++ R+      L+ +   PV+L+ HGL      W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A +DL  +I FI  KT   K++ VG+SQGT +   A  T P++   ++    L+PI+ + +  +P  + ++    D M+  L G  +  +++     L   LC   +    C++++  + G N    N SR + Y+
Sbjct:   50 SEIIKHKGYPSEEYEVATEDGYILSVNRIPRGQTRLKKEGSRPVVLLQHGLLGDASNWISNLPNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSIDQDEFWAFSYDEMARFDLPAVINFILQKTGQKKVYYVGYSQGTTMGFIAFSTMPELAHKIKMYFALAPIATVKYARSPGTKFLLLP--DMMIKVLFGRQEFLYQTRFFRQLFIYLCGQMILDQICSNIILLLGGFNTNNMNMSRANVYV 293          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIPK_HUMAN (Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.157e-29
Identity = 85/247 (34.41%), Postives = 127/247 (51.42%), Query Frame = 1
Query:  169 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNL-RVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSK-IFLVGHSQGTIVSLAAL-TQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLALGMHQLNFRSNVLID--LIDSLCNGHL---DCNDLLTAITGKN-CCFNNSRVDFYL 882
            S +I   GYP  E+ V TKDGY+L + R+    G   R    P V L HGL      W  +    SL F+LAD G+DVW+ N RG  WS  H+ LS KS  +W +S  ++A YDL   I FI  KT  K ++ VGHSQGT ++  A  T P++ + ++    L+P+  + +  +P+ +      L + V+ +      F  + L D  +   +CN  L    C++ L  ++G +    N SR+D YL
Sbjct:   36 SQIISYWGYPYEEYDVTTKDGYILGIYRIPHGRGCPGRTAPKPAVYLQHGLIASASNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRKHLKLSPKSPEYWAFSLDEMAKYDLPATINFIIEKTGQKRLYYVGHSQGTTIAFIAFSTNPELAKKIKIFFALAPVVTVKYTQSPMKKLTT---LSRRVVKVLFGDKMFHPHTLFDQFIATKVCNRKLFRRICSNFLFTLSGFDPQNLNMSRLDVYL 279          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIPK_MOUSE (Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.680e-29
Identity = 79/245 (32.24%), Postives = 128/245 (52.24%), Query Frame = 1
Query:  169 SHLIRPNGYPCTEHTVQTKDGYLLALQRVSSRNGNLRVQCGPPVL-LVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKTSSK-IFLVGHSQGTIVSLAAL-TQPDVVEMVEAAALLSPISYLDHITAPLVRRMVSMHLDQMVLALGMHQLNFRSNVLIDLIDSLCNG---HLDCNDLLTAITGKN-CCFNNSRVDFYL 882
            S LI   GYP  +H V T+DGY+L   R+    G  R      V+ L HGL    + W  +    SL F+LAD G+DVW+ N RG  WS  H+ LS KS  +W +SW ++A YDL   +  I  K+  K +F VGHSQGT ++  A  T P++ + +     L+P++ + +  +P+ +++ ++    + +  G    +  +     +   +CN    H  C++ L +++G +    N SR+D YL
Sbjct:   35 SELISYWGYPYEKHDVITEDGYILGTYRIPHGKGCSRKTAPKAVVYLQHGLIASANNWICNLPNNSLAFLLADSGYDVWLGNSRGNTWSRNHLRLSPKSPQYWAFSWDEMAKYDLPATVNLILEKSGQKQLFYVGHSQGTTIAFIAFSTNPELAKKIRLFFALAPVATVKYTRSPM-KKLTTLSRKAVKVLFGDKMFSTHTWFEQFIATKVCNRKLFHQLCSNFLFSLSGFDPQNLNMSRLDVYL 278          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LICH_MACFA (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Macaca fascicularis GN=LIPA PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.680e-29
Identity = 70/178 (39.33%), Postives = 100/178 (56.18%), Query Frame = 1
Query:  169 SHLIRPNGYPCTEHTVQTKDGYLLALQRVS-SRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQGTIVSLAALTQ-PDVVEMVEAAALLSPISYLDHITAPLVR 693
            S +I   G+P  E+ V+T+DGY+L L R+   R  +      P V L HGL      W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A YDL   I FI  KT   +++ VGHSQGT +   A +Q P++ + ++    L+P+  +D  T+P+ +
Sbjct:   38 SEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALAPVVSVDFCTSPMAK 215          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LICH_HUMAN (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Homo sapiens GN=LIPA PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 8.198e-29
Identity = 71/186 (38.17%), Postives = 101/186 (54.30%), Query Frame = 1
Query:  145 DDGTRSLCSHLIRPNGYPCTEHTVQTKDGYLLALQRVS-SRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQGTIVSLAALTQ-PDVVEMVEAAALLSPISYLDHITAPLVR 693
            D  T    S +I   G+P  E+ V+T+DGY+L L R+   R  +      P V L HGL      W  +    SLGFILAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A YDL   I FI  KT   +++ VGHSQGT +   A +Q P++ + ++    L P++ +   T+P+ +
Sbjct:   30 DPETNMNVSEIISYWGFPSEEYLVETEDGYILCLNRIPHGRKNHSDKGPKPVVFLQHGLLADSSNWVTNLANSSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEFWAFSYDEMAKYDLPASINFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAK 215          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LICH_MOUSE (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Mus musculus GN=Lipa PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 85/240 (35.42%), Postives = 122/240 (50.83%), Query Frame = 1
Query:  190 GYPCTEHTVQTKDGYLLALQRVSSR-NGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQGTIVSLAALTQ-PDVVEMVEAAALLSPISYLDHITAPLVR--RMVSMHLDQMVLALGMHQLNFRSNVLIDLIDSLCNGHLDCNDLLTAITGKNCCFNN-----SRVDFY 879
            GYP  EH+V T DGY+L++ R+      +      P V L HGL      W  +    SLGF+LAD GFDVW+ N RG  WS  H TLS     FW +S+ ++A YDL   I +I  KT   +I+ VGHSQG  +   A +Q P++ + ++   +L+P+  L+  + PL++  R+    L  M    G  Q   +S +L  L   +C  H+   +L   +    C FN      SRVD Y
Sbjct:   43 GYPGEEHSVLTGDGYILSIHRIPRGWKNHFGKGPRPVVYLQHGLLADSSNWVTNIDNSSLGFLLADRGFDVWMGNSRGNTWSLKHKTLSVSQDEFWAFSFDEMAKYDLPASINYILNKTGQEQIYYVGHSQGCTIGFIAFSQMPELAKKIKMFLVLAPVLSLNFASGPLLQLGRLPDPLLKDM---FGQKQFLPQSAMLKWLSIHVCT-HVIMKELCANVFFLLCGFNEKNLNMSRVDVY 278          
BLAST of CX675327 vs. ExPASy Swiss-Prot
Match: LIPG_RAT (Gastric triacylglycerol lipase OS=Rattus norvegicus GN=Lipf PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.444e-27
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 1
Query:  169 SHLIRPNGYPCTEHTVQTKDGYLLALQRVS-SRNGNLRVQCGPPVLLVHGLFMGGDAWFLDSTEESLGFILADYGFDVWVANVRGTHWSHGHVTLSEKSKGFWDWSWQDLALYDLAEMICFINLKT-SSKIFLVGHSQGTIVSLAAL-TQPDVVEMVEAAALLSPISYLDHITAPL 687
            S +I   GYPC E+ V T+DGY+L + R+   +N +  +   P V L HGL      W  +    SL F+LAD G+DVW+ N RG  WS  +V  S  S  FW +S+ ++A YDL   I FI  KT   KI  VGHSQGT +   A  T P + + ++    L+P++ + +  +PL
Sbjct:   35 SQMITYWGYPCQEYEVVTEDGYILGVYRIPHGKNNSENIGKRPVVYLQHGLIASATNWIANLPNNSLAFMLADAGYDVWLGNSRGNTWSRKNVYYSPDSVEFWAFSFDEMAKYDLPATINFIVQKTGQEKIHYVGHSQGTTIGFIAFSTNPTLAKKIKTFYALAPVATVKYTQSPL 210          
The following BLAST results are available for this feature:
BLAST of CX675327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
LIP1_ARATH9.484e-10268.87Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIP2_ARATH1.437e-4937.19Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIPM_HUMAN2.305e-3135.51Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2[more]
LIPM_MOUSE1.265e-2933.33Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1[more]
LIPK_HUMAN2.157e-2934.41Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2[more]
LIPK_MOUSE3.680e-2932.24Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1[more]
LICH_MACFA3.680e-2939.33Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LICH_HUMAN8.198e-2938.17Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LICH_MOUSE2.019e-2735.42Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPG_RAT3.444e-2738.64Gastric triacylglycerol lipase OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61E04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61E04-J7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675327 ID=CX675327; Name=CX675327; organism=Citrus sinensis; type=EST; length=922bp
CGCGCACTCAATTATCTCCGAGACAGATATGATATGAGGAGGTCACTGTC
ATCATCACTGGTGGTTGGCGCGATTTTCGCTCTCCTCCTACGCGAAATCT
CCGCCATCAAAACCGATGTTTCGAATCTACGCCGTCGATCACCGGACGAT
GGCACTCGCTCACTCTGCTCTCACCTCATCCGGCCCAACGGCTATCCCTG
CACCGAACACACAGTTCAAACAAAGGATGGTTACTTACTGGCTCTTCAAA
GAGTGTCATCTCGCAATGGGAATCTAAGAGTTCAATGCGGTCCCCCTGTT
TTGCTTGTGCATGGACTCTTCATGGGAGGTGATGCGTGGTTTTTGGATTC
TACGGAAGAGTCATTGGGCTTCATCCTTGCAGATTATGGTTTTGATGTAT
GGGTTGCAAATGTGCGTGGGACGCATTGGAGTCATGGCCATGTAACTTTA
TCCGAGAAGAGTAAGGGCTTTTGGGATTGGAGTTGGCAGGATTTGGCTCT
GTATGACCTTGCTGAAATGATATGTTTCATAAATTTGAAAACAAGCTCCA
AAATTTTCCTTGTTGGACATTCACAGGGAACCATCGTGTCTTTGGCTGCT
CTCACTCAGCCAGACGTAGTGGAAATGGTTGAGGCTGCTGCTCTTTTGAG
TCCTATATCATACTTGGATCATATCACTGCTCCACTTGTACGAAGAATGG
TTAGCATGCATCTTGATCAGATGGTTTTGGCTCTGGGCATGCATCAACTG
AATTTTAGAAGTAATGTGTTAATTGACCTCATCGACTCCCTATGCAATGG
CCATTTAGATTGCAATGACTTGCTAACTGCCATAACAGGGAAGAATTGTT
GCTTCAACAACTCACGAGTGGACTTCTATTTGGAAATGGACCTCACCCTT
CTTCTGCAAAAAACATTCATCA
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