CX675323

Overview
NameCX675323
Unique NameCX675323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7132 contig Csv1_Contig7132:821..1685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 402.905 bits (1034), Expect = 1.193e-111
Identity = 190/220 (86.36%), Postives = 206/220 (93.64%), Query Frame = -3
Query:  204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863
            +T+IPLLMYCTLPAVCL TN+FI+PQISN+ASI F+SLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVS+HLFAVFQG+LKVLAGIDTNFTVTSKASDEDGDF ELY+FKW          L++NLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWS+LLASIFSLLWVR+DPFT+RVTGPD+ +CGINC
Sbjct:  846 ITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFTSRVTGPDILECGINC 1065          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 400.593 bits (1028), Expect = 5.923e-111
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = -3
Query:  204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863
            LT+IPLL+YC LPA+CLLT KFI+P+ISN ASI FISLF+SIFATGILEMRWSGVGIDEWWRNEQFWVIGG+S+HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF ELYMFKW          L+INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW+ILLASIFSLLWVR+DPFTTRVTGPD + CGINC
Sbjct:  862 LTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQTCGINC 1081          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 2.251e-110
Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = -3
Query:  204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863
            LT+IPLL+YC LPA+CLLT KFI+P+ISN ASI FISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGG+S+HLFAVFQGLLKVLAGIDT+FTVTSKASDE+GDF ELYMFKW          L+INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW+ILLASIFSLLWVR+DPFTTRVTGPD ++CGINC
Sbjct:  854 LTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 2.251e-110
Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = -3
Query:  204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 863
            LT+IPLL+YC LPA+CLLT KFI+P+ISN ASI FISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGG+S+HLFAVFQGLLKVLAGIDT+FTVTSKASDE+GDF ELYMFKW          L+INLVGVVAG+SYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVW+ILLASIFSLLWVR+DPFTTRVTGPD ++CGINC
Sbjct:  854 LTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDTQKCGINC 1073          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.334e-99
Identity = 172/220 (78.18%), Postives = 192/220 (87.27%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS-DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T++PLL YCTLPAVCLLT KFIMP IS  AS+ FI+LF+SIFATGILEMRWSGV I+EWWRNEQFWVIGGVS+HLFAV QGLLKVLAGIDTNFTVTSKA+ DED +F ELY FKW          L++N++GVVAGVS AIN+G ++WGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPFT +  GPDV QCGINC
Sbjct:  836 TSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC 1055          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.334e-99
Identity = 172/220 (78.18%), Postives = 192/220 (87.27%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKAS-DEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T++PLL YCTLPAVCLLT KFIMP IS  AS+ FI+LF+SIFATGILEMRWSGV I+EWWRNEQFWVIGGVS+HLFAV QGLLKVLAGIDTNFTVTSKA+ DED +F ELY FKW          L++N++GVVAGVS AIN+G ++WGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPFT +  GPDV QCGINC
Sbjct:  836 TSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFTIKARGPDVRQCGINC 1055          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.513e-98
Identity = 170/221 (76.92%), Postives = 192/221 (86.88%), Query Frame = -3
Query:  204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRV-TGPDVEQCGINC 863
            +T+IPL+ YC LPA+CLLTNKFI+P+ISN A + FI LF SIFATGILE+RWSGVGI++WWRNEQFWVIGG S+HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF ELY+FKW          LVINLVG+VAG+SYAINSGYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV+VWSILLASIFSLLWV++DPF +       + QCG+NC
Sbjct:  856 ITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.513e-98
Identity = 170/221 (76.92%), Postives = 192/221 (86.88%), Query Frame = -3
Query:  204 LTAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRV-TGPDVEQCGINC 863
            +T+IPL+ YC LPA+CLLTNKFI+P+ISN A + FI LF SIFATGILE+RWSGVGI++WWRNEQFWVIGG S+HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDF ELY+FKW          LVINLVG+VAG+SYAINSGYQSWGPLFGKLFF+ WVI+HLYPFLKGLMGRQNRTPTIV+VWSILLASIFSLLWV++DPF +       + QCG+NC
Sbjct:  856 ITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.281e-97
Identity = 167/219 (76.26%), Postives = 189/219 (86.30%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YC LPA+CLLT+KFIMP IS  AS+ FISLF+SI  TGILE+RWSGV I+EWWRNEQFWVIGG+S+HLFAV QGLLK+LAGIDTNFTVTSKA+D+D DF ELY FKW          L+IN+VGVVAG+S AIN+GYQSWGPLFGKLFF+FWVIVHLYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVR+DPF  +  GPD  +CGINC
Sbjct:  809 TSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD-DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTSKCGINC 1026          
BLAST of CX675323 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.416e-96
Identity = 164/219 (74.89%), Postives = 193/219 (88.13%), Query Frame = -3
Query:  204 TAIPLLMYCTLPAVCLLTNKFIMPQISNLASIVFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWXXXXXXXXXXLVINLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPDVEQCGINC 860
            T+IPLL YCTLPA+CLLT KFI P+++N+AS+ F+SLF+ IFATGILEMRWSGVGID+WWRNEQFWVIGGVSSHLFAVFQGLLKV+AGIDT+FTVTSK  D++ +F+ELY FKW          L++N +GVVAGVS AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF  +  GP +E+CG++C
Sbjct:  874 TSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEECGLDC 1091          
The following BLAST results are available for this feature:
BLAST of CX675323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CESA3_ARATH1.193e-11186.36Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA8_ORYSJ5.923e-11186.36Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA2_ORYSJ2.251e-11085.91Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI2.251e-11085.91Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA9_ORYSJ2.334e-9978.18Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI2.334e-9978.18Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA1_ORYSJ1.513e-9876.92Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI1.513e-9876.92Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA7_ARATH1.281e-9776.26Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA5_ORYSJ2.416e-9674.89Probable cellulose synthase A catalytic subunit 5 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61E02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61E02-J3-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675323 ID=CX675323; Name=CX675323; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTTAGTTTTCACCACCTATAGATATATAAATATATGTATCCTGCA
CAAGATGCGAATTCACATACACAAAAACAAGTTCACATACACAAAAACAA
GTTCACTGACAGGACGAGGAGGCAAAATCATGAACTTCAGTGATTCCCAC
CTTTTAGACTTGAGACCAAAACAATTTTTCTGAAATACAGCCACTATTTG
TCAGCAGTTGATTCCACATTGCTCGACATCAGGACCAGTGACTCTGGTGG
TAAAGGGATCAACTCGCACCCATAGTAAAGAGAATATGGAGGCAAGGAGA
ATTGACCACACGACAACAATGGTGGGTGTCCGGTTTTGGCGTCCCATCAA
ACCTTTGAGGAAGGGGTAAAGATGGACGATCACCCAAAAGGCAAAGAATA
GCTTACCAAAGAGAGGACCCCATGATTGATACCCGCTGTTGATGGCATAC
GAGACACCCGCAACTACACCAACCAAGTTTATGACAAGAAGAGTTGTTGG
TGGAATAAGTAGTGTTGTCCATTTGAACATATAGAGCTCAGTAAAATCTC
CGTCTTCATCTGATGCCTTGGAGGTGACAGTGAAGTTGGTGTCAATACCA
GCAAGTACTTTGAGAAGACCTTGGAAAACAGCAAATAGATGGGATGAAAC
ACCGCCAATAACCCAAAACTGTTCGTTTCTCCACCATTCATCGATTCCAA
CACCACTCCACCTCATTTCCAGAATACCAGTGGCGAAGATGGACAGAAAG
AGAGAAATAAACACTATACTGGCAAGGTTACTAATCTGAGGCATAATGAA
CTTGTTCGTTAATAGACAGACAGCTGGCAGCGTGCAATACATGAGAAGAG
GAATTGCAGTGAGAG
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