CK937383

Overview
NameCK937383
Unique NameCK937383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10071 contig Csv1_Contig10071:18..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.994e-32
Identity = 91/231 (39.39%), Postives = 113/231 (48.92%), Query Frame = 2
Query:  107 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 697
            VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECE 247          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30
Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 2
Query:  407 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP 703
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAP 283          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  470 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 697
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECE 96          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  446 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 697
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCE 135          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 2
Query:  422 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 697
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECE 133          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 42/98 (42.86%), Postives = 55/98 (56.12%), Query Frame = 2
Query:  410 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP 703
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELP 179          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2
Query:  446 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 697
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECE 166          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 2
Query:  461 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP 703
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELP 437          
BLAST of CK937383 vs. ExPASy Swiss-Prot
Match: BURP7_ORYSJ (BURP domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=BURP7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.076e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2
Query:  488 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIM 673
            +FFLEKDL PG K+ LHFT+ + GA  L R  A S P +++KLPEI +Q SV  GS  A+ M
Sbjct:   64 VFFLEKDLFPGSKLTLHFTRATAGAALLPRGRADSVPLATEKLPEILSQLSVPAGSPAADAM 125          
The following BLAST results are available for this feature:
BLAST of CK937383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RD22_ARATH3.994e-3239.39Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ1.678e-3063.64BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP6_ORYSJ8.938e-1653.95BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP2_ORYSJ1.525e-1548.81BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ2.202e-1445.65BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP5_ORYSJ6.406e-1442.86BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP8_ORYSJ1.427e-1350.59BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURPH_ORYSJ7.082e-1348.24BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP7_ORYSJ5.076e-1153.23BURP domain-containing protein 7 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004510_F08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937383 ID=CK937383; Name=CK937383; organism=Citrus sinensis; type=EST; length=709bp
GGGGAGATACATACCATCTTGTATTCTGGGTGTCTTTTNNNACATACTCA
AAGCTATAATGGAGTTTCACTTGTTGCCCATCCTTGCTTTCCTCAGTCTA
GCACTGGTAGCAAGTCATGCTGACATTTCTCCTGAGCTTTACTGGAAAAC
TGTACTGCCAAATTCCCCGATGCCAAAAGCTGTCAAAGATCTTCTACAGC
CAGATGTGCTGGAAGACAAAAGCACCTCTGTCAACGTAGGGAAGGGTGGT
GTCAATGTGGATGCAGGGAAAGGAAAGCCCGGTGGTGGCACCCATGTGAA
TGTTGGGGGTAAGGGCGTTGGTGTAAACACTGGAAAGCCTGACAAAAGAA
CCAGTGTTGGTGTTGGCAAAGGAGGAGTATCCGTAAGTACAGGACACAAG
GGAAAGCCAGTTTATGTTGGAGTAAGCCCATTCAACTATGTATATGCTGC
AAATGAGAACCAACTCCATGATGACCCGAATACAGCTCTTTTCTTCTTGG
AAAAGGACTTGCATCCTGGCATGAAGATGAACTTGCACTTCACTCAAACT
TCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGCCAAATCAACTCCTTT
CTCGTCTGACAAATTGCCTGAGATCTTTAACCAGTTTTCCGTGAAACCTG
GATCAGTTGAAGCTGAAATAATGCAGAACACAATCAAAGAGTGTGAAGAC
CCTGGCATT
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