CX675285

Overview
NameCX675285
Unique NameCX675285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10130 contig Csv1_Contig10130:1002..1887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX675285 vs. ExPASy Swiss-Prot
Match: Y4105_ARATH (Uncharacterized protein At4g01050 OS=Arabidopsis thaliana GN=At4g01050 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.169e-31
Identity = 85/167 (50.90%), Postives = 99/167 (59.28%), Query Frame = -1 
Query:  444 FSEIETILQILGSAALVQFASKKLLFAEDRKQTLQQVDEFLNTKVAPKELADDIKQIGKTLLPSPANGKALPA---------------------------------STDSKVQKADDSPEAVPQPKVEAAADPPPQVNSVPKTEVKADSLPRFQRSLSPYPAYPDLK 845
            F+EIETILQ+LGSAALVQ A KKLLFAEDRKQTL+QVDEFLNTKVAPKEL D++K+IGK LLP   + KALPA                                 + D  V + +  PE VP P +EAA     QV + P TE +A   P   R LSPY +YPDLK
Sbjct:  294 FTEIETILQLLGSAALVQLAGKKLLFAEDRKQTLKQVDEFLNTKVAPKELVDELKEIGKALLPQSTSNKALPAPATVTAEAESATATTTTVDKPVPEPETVAATTTTVDKPVPEPEPVPEPVPVPAIEAAV--AAQVITEP-TETEAKPKPH-SRPLSPYASYPDLK 456
The following BLAST results are available for this feature:
BLAST of CX675285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4105_ARATH2.169e-3150.90Uncharacterized protein At4g01050 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_61C03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61C03-F5-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675285 ID=CX675285; Name=CX675285; organism=Citrus sinensis; type=EST; length=884bp
TTTTTTTTTTTTTTTTTCTCCATAATACAATACATTTAACAATATAACAA
TATAATAATTAACAATATAATGTGCCAAACGCATCCTTTACATATCTCTA
TCTAATAAAGAAACCATGGATGATCCAATTCAATAGACACACAAGTGGCT
CTGGCTTATGCAGGCATACGAAGCAAATCTACAAGACATCTGTGACCATT
GCAAAAAGTAAATCAAGCAGCATAGAACACAACATGATGAATGTGGCCGA
CTGACTATTTCGTGATATAAGCAATTCGTCGCGACACATTGGACTAAAAG
TTTCAATAATAACTGCAGATTGCACAACTCACTAGGTAGCTTTCATATTC
CCAACCATAGCAGTTGCCTGTTATAGAAACATACTTGCAGATGCTTAAAT
CTGTAACAATCTAGGGCTGTGATGGGGTAGGAGAAGTTGGAGGCTTCAAA
TCTGGATAAGCAGGGTATGGTGAAAGAGATCTTTGAAATCTAGGAAGTGA
GTCTGCTTTAACTTCTGTTTTGGGCACCGAATTTACTTGGGGAGGGGGGT
CTGCAGCTGCTTCTACTTTTGGCTGGGGGACAGCCTCAGGTGAATCATCT
GCCTTCTGGACTTTGCTGTCAGTGGAGGCAGGGAGAGCCTTGCCATTTGC
CGGTGATGGTAGAAGTGTCTTTCCAATTTGCTTTATGTCATCAGCAAGCT
CTTTAGGGGCGACCTTGGTGTTCAGGAATTCATCAACCTGTTGTAGTGTT
TGTTTCCGATCCTCTGCAAACAGGAGCTTCTTGCTAGCAAATTGAACAAG
AGCAGCTGAGCCTAGAATTTGCAATATCGTTTCTATCTCTGAAAATGCCA
AAACACCCAATCCTGCAGCTGCAGCAATTGCAAG
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